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Deep sequencing reveals mixed infection with 2009 pandemic influenza A (H1N1) virus strains and the emergence of oseltamivir resistance.
Ghedin E, Laplante J, DePasse J, Wentworth DE, Santos RP, Lepow ML, Porter J, Stellrecht K, Lin X, Operario D, Griesemer S, Fitch A, Halpin RA, Stockwell TB, Spiro DJ, Holmes EC, St George K. Ghedin E, et al. Among authors: stockwell tb. J Infect Dis. 2011 Jan 15;203(2):168-74. doi: 10.1093/infdis/jiq040. J Infect Dis. 2011. PMID: 21288815 Free PMC article.
Extensive geographical mixing of 2009 human H1N1 influenza A virus in a single university community.
Holmes EC, Ghedin E, Halpin RA, Stockwell TB, Zhang XQ, Fleming R, Davey R, Benson CA, Mehta S, Taplitz R, Liu YT, Brouwer KC, Wentworth DE, Lin X, Schooley RT; INSIGHT FLU002 Study Group. Holmes EC, et al. Among authors: stockwell tb. J Virol. 2011 Jul;85(14):6923-9. doi: 10.1128/JVI.00438-11. Epub 2011 May 18. J Virol. 2011. PMID: 21593168 Free PMC article.
Sequence analysis of in vivo defective interfering-like RNA of influenza A H1N1 pandemic virus.
Saira K, Lin X, DePasse JV, Halpin R, Twaddle A, Stockwell T, Angus B, Cozzi-Lepri A, Delfino M, Dugan V, Dwyer DE, Freiberg M, Horban A, Losso M, Lynfield R, Wentworth DN, Holmes EC, Davey R, Wentworth DE, Ghedin E; INSIGHT FLU002 Study Group; INSIGHT FLU003 Study Group. Saira K, et al. J Virol. 2013 Jul;87(14):8064-74. doi: 10.1128/JVI.00240-13. Epub 2013 May 15. J Virol. 2013. PMID: 23678180 Free PMC article.
Phylogeography of Influenza A(H3N2) Virus in Peru, 2010-2012.
Pollett S, Nelson MI, Kasper M, Tinoco Y, Simons M, Romero C, Silva M, Lin X, Halpin RA, Fedorova N, Stockwell TB, Wentworth D, Holmes EC, Bausch DG. Pollett S, et al. Among authors: stockwell tb. Emerg Infect Dis. 2015 Aug;21(8):1330-8. doi: 10.3201/eid2108.150084. Emerg Infect Dis. 2015. PMID: 26196599 Free PMC article.
Quantifying influenza virus diversity and transmission in humans.
Poon LL, Song T, Rosenfeld R, Lin X, Rogers MB, Zhou B, Sebra R, Halpin RA, Guan Y, Twaddle A, DePasse JV, Stockwell TB, Wentworth DE, Holmes EC, Greenbaum B, Peiris JS, Cowling BJ, Ghedin E. Poon LL, et al. Among authors: stockwell tb. Nat Genet. 2016 Feb;48(2):195-200. doi: 10.1038/ng.3479. Epub 2016 Jan 4. Nat Genet. 2016. PMID: 26727660 Free PMC article.
Deep Sequencing of Influenza A Virus from a Human Challenge Study Reveals a Selective Bottleneck and Only Limited Intrahost Genetic Diversification.
Sobel Leonard A, McClain MT, Smith GJ, Wentworth DE, Halpin RA, Lin X, Ransier A, Stockwell TB, Das SR, Gilbert AS, Lambkin-Williams R, Ginsburg GS, Woods CW, Koelle K. Sobel Leonard A, et al. Among authors: stockwell tb. J Virol. 2016 Nov 28;90(24):11247-11258. doi: 10.1128/JVI.01657-16. Print 2016 Dec 15. J Virol. 2016. PMID: 27707932 Free PMC article.
Multiplex Reverse Transcription-PCR for Simultaneous Surveillance of Influenza A and B Viruses.
Zhou B, Deng YM, Barnes JR, Sessions OM, Chou TW, Wilson M, Stark TJ, Volk M, Spirason N, Halpin RA, Kamaraj US, Ding T, Stockwell TB, Salvatore M, Ghedin E, Barr IG, Wentworth DE. Zhou B, et al. Among authors: stockwell tb. J Clin Microbiol. 2017 Dec;55(12):3492-3501. doi: 10.1128/JCM.00957-17. Epub 2017 Oct 4. J Clin Microbiol. 2017. PMID: 28978683 Free PMC article.
Poor Immunogenicity, Not Vaccine Strain Egg Adaptation, May Explain the Low H3N2 Influenza Vaccine Effectiveness in 2012-2013.
Cobey S, Gouma S, Parkhouse K, Chambers BS, Ertl HC, Schmader KE, Halpin RA, Lin X, Stockwell TB, Das SR, Landon E, Tesic V, Youngster I, Pinsky BA, Wentworth DE, Hensley SE, Grad YH. Cobey S, et al. Among authors: stockwell tb. Clin Infect Dis. 2018 Jul 18;67(3):327-333. doi: 10.1093/cid/ciy097. Clin Infect Dis. 2018. PMID: 29471464 Free PMC article.
Genomic reassortment of influenza A virus in North American swine, 1998-2011.
Nelson MI, Detmer SE, Wentworth DE, Tan Y, Schwartzbard A, Halpin RA, Stockwell TB, Lin X, Vincent AL, Gramer MR, Holmes EC. Nelson MI, et al. Among authors: stockwell tb. J Gen Virol. 2012 Dec;93(Pt 12):2584-2589. doi: 10.1099/vir.0.045930-0. Epub 2012 Sep 19. J Gen Virol. 2012. PMID: 22993190 Free PMC article.
78 results