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FNV: light-weight flash-based network and pathway viewer.
Dannenfelser R, Lachmann A, Szenk M, Ma'ayan A. Dannenfelser R, et al. Bioinformatics. 2011 Apr 15;27(8):1181-2. doi: 10.1093/bioinformatics/btr098. Epub 2011 Feb 23. Bioinformatics. 2011. PMID: 21349871 Free PMC article.
Recovering protein-protein and domain-domain interactions from aggregation of IP-MS proteomics of coregulator complexes.
Mazloom AR, Dannenfelser R, Clark NR, Grigoryan AV, Linder KM, Cardozo TJ, Bond JC, Boran AD, Iyengar R, Malovannaya A, Lanz RB, Ma'ayan A. Mazloom AR, et al. Among authors: dannenfelser r. PLoS Comput Biol. 2011 Dec;7(12):e1002319. doi: 10.1371/journal.pcbi.1002319. Epub 2011 Dec 29. PLoS Comput Biol. 2011. PMID: 22219718 Free PMC article.
Patterns and rates of exonic de novo mutations in autism spectrum disorders.
Neale BM, Kou Y, Liu L, Ma'ayan A, Samocha KE, Sabo A, Lin CF, Stevens C, Wang LS, Makarov V, Polak P, Yoon S, Maguire J, Crawford EL, Campbell NG, Geller ET, Valladares O, Schafer C, Liu H, Zhao T, Cai G, Lihm J, Dannenfelser R, Jabado O, Peralta Z, Nagaswamy U, Muzny D, Reid JG, Newsham I, Wu Y, Lewis L, Han Y, Voight BF, Lim E, Rossin E, Kirby A, Flannick J, Fromer M, Shakir K, Fennell T, Garimella K, Banks E, Poplin R, Gabriel S, DePristo M, Wimbish JR, Boone BE, Levy SE, Betancur C, Sunyaev S, Boerwinkle E, Buxbaum JD, Cook EH Jr, Devlin B, Gibbs RA, Roeder K, Schellenberg GD, Sutcliffe JS, Daly MJ. Neale BM, et al. Among authors: dannenfelser r. Nature. 2012 Apr 4;485(7397):242-5. doi: 10.1038/nature11011. Nature. 2012. PMID: 22495311 Free PMC article.
JCoDA: a tool for detecting evolutionary selection.
Steinway SN, Dannenfelser R, Laucius CD, Hayes JE, Nayak S. Steinway SN, et al. Among authors: dannenfelser r. BMC Bioinformatics. 2010 May 27;11:284. doi: 10.1186/1471-2105-11-284. BMC Bioinformatics. 2010. PMID: 20507581 Free PMC article.
Selective Neuronal Vulnerability in Alzheimer's Disease: A Network-Based Analysis.
Roussarie JP, Yao V, Rodriguez-Rodriguez P, Oughtred R, Rust J, Plautz Z, Kasturia S, Albornoz C, Wang W, Schmidt EF, Dannenfelser R, Tadych A, Brichta L, Barnea-Cramer A, Heintz N, Hof PR, Heiman M, Dolinski K, Flajolet M, Troyanskaya OG, Greengard P. Roussarie JP, et al. Among authors: dannenfelser r. Neuron. 2020 Sep 9;107(5):821-835.e12. doi: 10.1016/j.neuron.2020.06.010. Epub 2020 Jun 29. Neuron. 2020. PMID: 32603655 Free PMC article.
31 results