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The EBI enzyme portal.
Alcántara R, Onwubiko J, Cao H, Matos Pd, Cham JA, Jacobsen J, Holliday GL, Fischer JD, Rahman SA, Jassal B, Goujon M, Rowland F, Velankar S, López R, Overington JP, Kleywegt GJ, Hermjakob H, O'Donovan C, Martín MJ, Thornton JM, Steinbeck C. Alcántara R, et al. Among authors: rahman sa. Nucleic Acids Res. 2013 Jan;41(Database issue):D773-80. doi: 10.1093/nar/gks1112. Epub 2012 Nov 21. Nucleic Acids Res. 2013. PMID: 23175605 Free PMC article.
MACiE: exploring the diversity of biochemical reactions.
Holliday GL, Andreini C, Fischer JD, Rahman SA, Almonacid DE, Williams ST, Pearson WR. Holliday GL, et al. Among authors: rahman sa. Nucleic Acids Res. 2012 Jan;40(Database issue):D783-9. doi: 10.1093/nar/gkr799. Epub 2011 Nov 3. Nucleic Acids Res. 2012. PMID: 22058127 Free PMC article.
Small Molecule Subgraph Detector (SMSD) toolkit.
Rahman SA, Bashton M, Holliday GL, Schrader R, Thornton JM. Rahman SA, et al. J Cheminform. 2009 Aug 10;1(1):12. doi: 10.1186/1758-2946-1-12. J Cheminform. 2009. PMID: 20298518 Free PMC article.
Exploring the biological and chemical complexity of the ligases.
Holliday GL, Rahman SA, Furnham N, Thornton JM. Holliday GL, et al. Among authors: rahman sa. J Mol Biol. 2014 May 15;426(10):2098-111. doi: 10.1016/j.jmb.2014.03.008. Epub 2014 Mar 21. J Mol Biol. 2014. PMID: 24657765 Free PMC article. Review.
The Classification and Evolution of Enzyme Function.
Martínez Cuesta S, Rahman SA, Furnham N, Thornton JM. Martínez Cuesta S, et al. Among authors: rahman sa. Biophys J. 2015 Sep 15;109(6):1082-6. doi: 10.1016/j.bpj.2015.04.020. Epub 2015 May 15. Biophys J. 2015. PMID: 25986631 Free PMC article. Review.
Characterising Complex Enzyme Reaction Data.
Dönertaş HM, Martínez Cuesta S, Rahman SA, Thornton JM. Dönertaş HM, et al. Among authors: rahman sa. PLoS One. 2016 Feb 3;11(2):e0147952. doi: 10.1371/journal.pone.0147952. eCollection 2016. PLoS One. 2016. PMID: 26840640 Free PMC article.
Exploring the chemistry and evolution of the isomerases.
Martínez Cuesta S, Rahman SA, Thornton JM. Martínez Cuesta S, et al. Among authors: rahman sa. Proc Natl Acad Sci U S A. 2016 Feb 16;113(7):1796-801. doi: 10.1073/pnas.1509494113. Epub 2016 Feb 3. Proc Natl Acad Sci U S A. 2016. PMID: 26842835 Free PMC article.
450 results