de Ridder J - Search Results

1

de Ridder D, de Ridder J, Reinders MJ. de Ridder D, et al. Among authors: de ridder j. Brief Bioinform. 2013 Sep;14(5):633-47. doi: 10.1093/bib/bbt020. Epub 2013 Apr 4. Brief Bioinform. 2013. PMID: 23559637 Review.

2

Inferring combinatorial association logic networks in multimodal genome-wide screens.

de Ridder J, Gerrits A, Bot J, de Haan G, Reinders M, Wessels L. de Ridder J, et al. Among authors: de haan g. Bioinformatics. 2010 Jun 15;26(12):i149-57. doi: 10.1093/bioinformatics/btq211. Bioinformatics. 2010. PMID: 20529900 Free PMC article.

3

Detecting recurrent gene mutation in interaction network context using multi-scale graph diffusion.

Babaei S, Hulsman M, Reinders M, de Ridder J. Babaei S, et al. Among authors: de ridder j. BMC Bioinformatics. 2013 Jan 23;14:29. doi: 10.1186/1471-2105-14-29. BMC Bioinformatics. 2013. PMID: 23343428 Free PMC article.

4

Detecting statistically significant common insertion sites in retroviral insertional mutagenesis screens.

de Ridder J, Uren A, Kool J, Reinders M, Wessels L. de Ridder J, et al. PLoS Comput Biol. 2006 Dec 8;2(12):e166. doi: 10.1371/journal.pcbi.0020166. Epub 2006 Oct 24. PLoS Comput Biol. 2006. PMID: 17154714 Free PMC article.

5

3D hotspots of recurrent retroviral insertions reveal long-range interactions with cancer genes.

Babaei S, Akhtar W, de Jong J, Reinders M, de Ridder J. Babaei S, et al. Among authors: de ridder j, de jong j. Nat Commun. 2015 Feb 27;6:6381. doi: 10.1038/ncomms7381. Nat Commun. 2015. PMID: 25721899 Free PMC article.

6

Pan-cancer subtyping in a 2D-map shows substructures that are driven by specific combinations of molecular characteristics.

Taskesen E, Huisman SM, Mahfouz A, Krijthe JH, de Ridder J, van de Stolpe A, van den Akker E, Verheagh W, Reinders MJ. Taskesen E, et al. Among authors: de ridder j. Sci Rep. 2016 Apr 25;6:24949. doi: 10.1038/srep24949. Sci Rep. 2016. PMID: 27109935 Free PMC article.

7

HAT: hypergeometric analysis of tiling-arrays with application to promoter-GeneChip data.

Taskesen E, Beekman R, de Ridder J, Wouters BJ, Peeters JK, Touw IP, Reinders MJ, Delwel R. Taskesen E, et al. Among authors: de ridder j. BMC Bioinformatics. 2010 May 21;11:275. doi: 10.1186/1471-2105-11-275. BMC Bioinformatics. 2010. PMID: 20492700 Free PMC article.

8

Co-occurrence analysis of insertional mutagenesis data reveals cooperating oncogenes.

de Ridder J, Kool J, Uren A, Bot J, Wessels L, Reinders M. de Ridder J, et al. Bioinformatics. 2007 Jul 1;23(13):i133-41. doi: 10.1093/bioinformatics/btm202. Bioinformatics. 2007. PMID: 17646289

9

Author Correction: Pan-cancer subtyping in a 2D-map shows substructures that are driven by specific combinations of molecular characteristics.

Taskesen E, Huisman SMH, Mahfouz A, Krijthe JH, de Ridder J, van de Stolpe A, van den Akker E, Verhaegh W, Reinders MJT. Taskesen E, et al. Among authors: de ridder j. Sci Rep. 2018 Nov 23;8(1):17304. doi: 10.1038/s41598-018-35518-w. Sci Rep. 2018. PMID: 30470773 Free PMC article.

10

ECCB 2016: The 15th European Conference on Computational Biology.

ECCB 2016 Local Steering Committee; Heringa J Eccb 2016 Conference, Reinders M Eccb 2016 Co-Chair A, Abeln S Eccb 2016 Proceeding, de Ridder J Eccb 2016 Highlights. ECCB 2016 Local Steering Committee, et al. Among authors: de ridder j eccb 2016 highlights. Bioinformatics. 2016 Sep 1;32(17):i389-i392. doi: 10.1093/bioinformatics/btw481. Bioinformatics. 2016. PMID: 27587653 No abstract available.

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