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Extended methods for spatial cell classification with DBSCAN-CellX.
Küchenhoff L, Lukas P, Metz-Zumaran C, Rothhaar P, Ruggieri A, Lohmann V, Höfer T, Stanifer ML, Boulant S, Talemi SR, Graw F. Küchenhoff L, et al. Among authors: boulant s. Sci Rep. 2023 Nov 1;13(1):18868. doi: 10.1038/s41598-023-45190-4. Sci Rep. 2023. PMID: 37914751 Free PMC article.
The population context is a driver of the heterogeneous response of epithelial cells to interferons.
Metz-Zumaran C, Uckeley ZM, Doldan P, Muraca F, Keser Y, Lukas P, Kuropka B, Küchenhoff L, Rastgou Talemi S, Höfer T, Freund C, Cavalcanti-Adam EA, Graw F, Stanifer M, Boulant S. Metz-Zumaran C, et al. Among authors: boulant s. Mol Syst Biol. 2024 Mar;20(3):242-275. doi: 10.1038/s44320-024-00011-2. Epub 2024 Jan 25. Mol Syst Biol. 2024. PMID: 38273161 Free PMC article.
Genetic regulation of OAS1 nonsense-mediated decay underlies association with risk of severe COVID-19.
Banday AR, Stanifer ML, Florez-Vargas O, Onabajo OO, Zahoor MA, Papenberg BW, Ring TJ, Lee CH, Andreakos E, Arons E, Barsh G, Biesecker LG, Boyle DL, Burnett-Hartman A, Carrington M, Chang E, Choe PG, Chrisholm RL, Dalgard C, Edberg J, Erdmann N, Feigelson HS, Firestein GS, Gehring AJ, Ho M, Holland S, Hutchinson AA, Im H, Ison MG, Kim HB, Kreitman RJ, Korf BR, Mirabello L, Pacheco JA, Peluso MJ, Rader DJ, Redden DT, Ritchie MD, Rosenbloom B, Sant Anna HP, Savage S, Siouti E, Triantafyllia V, Vargas JM, Verma A, Vij V, Wesemann DR, Yeager M, Yu X, Zhang Y, Boulant S, Chanock SJ, Feld JJ, Prokunina-Olsson L. Banday AR, et al. Among authors: boulant s. medRxiv [Preprint]. 2021 Jul 13:2021.07.09.21260221. doi: 10.1101/2021.07.09.21260221. medRxiv. 2021. PMID: 34282422 Free PMC article. Updated. Preprint.
Hypoxia and HIF-1α promote lytic de novo KSHV infection.
Lee S-C, Naik NG, Tombácz D, Gulyás G, Kakuk B, Boldogkői Z, Hall K, Papp B, Boulant S, Toth Z. Lee S-C, et al. Among authors: boulant s. J Virol. 2023 Nov 30;97(11):e0097223. doi: 10.1128/jvi.00972-23. Epub 2023 Nov 1. J Virol. 2023. PMID: 37909728 Free PMC article.
104 results