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Using geneid to identify genes.
Blanco E, Parra G, Guigó R. Blanco E, et al. Among authors: parra g. Curr Protoc Bioinformatics. 2007 Jun;Chapter 4:Unit 4.3. doi: 10.1002/0471250953.bi0403s18. Curr Protoc Bioinformatics. 2007. PMID: 18428791
Comparative gene prediction in human and mouse.
Parra G, Agarwal P, Abril JF, Wiehe T, Fickett JW, Guigó R. Parra G, et al. Genome Res. 2003 Jan;13(1):108-17. doi: 10.1101/gr.871403. Genome Res. 2003. PMID: 12529313 Free PMC article.
Using geneid to Identify Genes.
Alioto T, Blanco E, Parra G, Guigó R. Alioto T, et al. Among authors: parra g. Curr Protoc Bioinformatics. 2018 Dec;64(1):e56. doi: 10.1002/cpbi.56. Epub 2018 Oct 17. Curr Protoc Bioinformatics. 2018. PMID: 30332532
Patterns of coding variation in the complete exomes of three Neandertals.
Castellano S, Parra G, Sánchez-Quinto FA, Racimo F, Kuhlwilm M, Kircher M, Sawyer S, Fu Q, Heinze A, Nickel B, Dabney J, Siebauer M, White L, Burbano HA, Renaud G, Stenzel U, Lalueza-Fox C, de la Rasilla M, Rosas A, Rudan P, Brajković D, Kucan Ž, Gušic I, Shunkov MV, Derevianko AP, Viola B, Meyer M, Kelso J, Andrés AM, Pääbo S. Castellano S, et al. Among authors: parra g. Proc Natl Acad Sci U S A. 2014 May 6;111(18):6666-71. doi: 10.1073/pnas.1405138111. Epub 2014 Apr 21. Proc Natl Acad Sci U S A. 2014. PMID: 24753607 Free PMC article.
Recent Selection Changes in Human Genes under Long-Term Balancing Selection.
de Filippo C, Key FM, Ghirotto S, Benazzo A, Meneu JR, Weihmann A; NISC Comparative Sequence Program; Parra G, Green ED, Andrés AM. de Filippo C, et al. Among authors: parra g. Mol Biol Evol. 2016 Jun;33(6):1435-47. doi: 10.1093/molbev/msw023. Epub 2016 Feb 1. Mol Biol Evol. 2016. PMID: 26831942 Free PMC article.
GeneID in Drosophila.
Parra G, Blanco E, Guigó R. Parra G, et al. Genome Res. 2000 Apr;10(4):511-5. doi: 10.1101/gr.10.4.511. Genome Res. 2000. PMID: 10779490 Free PMC article.
371 results