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NMR Exchange Format: a unified and open standard for representation of NMR restraint data.
Gutmanas A, Adams PD, Bardiaux B, Berman HM, Case DA, Fogh RH, Güntert P, Hendrickx PM, Herrmann T, Kleywegt GJ, Kobayashi N, Lange OF, Markley JL, Montelione GT, Nilges M, Ragan TJ, Schwieters CD, Tejero R, Ulrich EL, Velankar S, Vranken WF, Wedell JR, Westbrook J, Wishart DS, Vuister GW. Gutmanas A, et al. Among authors: ulrich el. Nat Struct Mol Biol. 2015 Jun;22(6):433-4. doi: 10.1038/nsmb.3041. Nat Struct Mol Biol. 2015. PMID: 26036565 Free PMC article. No abstract available.
The CCPN project: an interim report on a data model for the NMR community.
Fogh R, Ionides J, Ulrich E, Boucher W, Vranken W, Linge JP, Habeck M, Rieping W, Bhat TN, Westbrook J, Henrick K, Gilliland G, Berman H, Thornton J, Nilges M, Markley J, Laue E. Fogh R, et al. Nat Struct Biol. 2002 Jun;9(6):416-8. doi: 10.1038/nsb0602-416. Nat Struct Biol. 2002. PMID: 12032555
Straightforward and complete deposition of NMR data to the PDBe.
Penkett CJ, van Ginkel G, Velankar S, Swaminathan J, Ulrich EL, Mading S, Stevens TJ, Fogh RH, Gutmanas A, Kleywegt GJ, Henrick K, Vranken WF. Penkett CJ, et al. Among authors: ulrich el. J Biomol NMR. 2010 Oct;48(2):85-92. doi: 10.1007/s10858-010-9439-3. Epub 2010 Aug 3. J Biomol NMR. 2010. PMID: 20680401 Free PMC article.
MolProbity for the masses-of data.
Chen VB, Wedell JR, Wenger RK, Ulrich EL, Markley JL. Chen VB, et al. Among authors: ulrich el. J Biomol NMR. 2015 Sep;63(1):77-83. doi: 10.1007/s10858-015-9969-9. Epub 2015 Jul 21. J Biomol NMR. 2015. PMID: 26195077 Free PMC article.
Validation of Structures in the Protein Data Bank.
Gore S, Sanz García E, Hendrickx PMS, Gutmanas A, Westbrook JD, Yang H, Feng Z, Baskaran K, Berrisford JM, Hudson BP, Ikegawa Y, Kobayashi N, Lawson CL, Mading S, Mak L, Mukhopadhyay A, Oldfield TJ, Patwardhan A, Peisach E, Sahni G, Sekharan MR, Sen S, Shao C, Smart OS, Ulrich EL, Yamashita R, Quesada M, Young JY, Nakamura H, Markley JL, Berman HM, Burley SK, Velankar S, Kleywegt GJ. Gore S, et al. Among authors: ulrich el. Structure. 2017 Dec 5;25(12):1916-1927. doi: 10.1016/j.str.2017.10.009. Epub 2017 Nov 22. Structure. 2017. PMID: 29174494 Free PMC article.
Announcing mandatory submission of PDBx/mmCIF format files for crystallographic depositions to the Protein Data Bank (PDB).
Adams PD, Afonine PV, Baskaran K, Berman HM, Berrisford J, Bricogne G, Brown DG, Burley SK, Chen M, Feng Z, Flensburg C, Gutmanas A, Hoch JC, Ikegawa Y, Kengaku Y, Krissinel E, Kurisu G, Liang Y, Liebschner D, Mak L, Markley JL, Moriarty NW, Murshudov GN, Noble M, Peisach E, Persikova I, Poon BK, Sobolev OV, Ulrich EL, Velankar S, Vonrhein C, Westbrook J, Wojdyr M, Yokochi M, Young JY. Adams PD, et al. Among authors: ulrich el. Acta Crystallogr D Struct Biol. 2019 Apr 1;75(Pt 4):451-454. doi: 10.1107/S2059798319004522. Epub 2019 Apr 8. Acta Crystallogr D Struct Biol. 2019. PMID: 30988261 Free PMC article.
BioMagResBank (BMRB) as a Resource for Structural Biology.
Romero PR, Kobayashi N, Wedell JR, Baskaran K, Iwata T, Yokochi M, Maziuk D, Yao H, Fujiwara T, Kurusu G, Ulrich EL, Hoch JC, Markley JL. Romero PR, et al. Among authors: ulrich el. Methods Mol Biol. 2020;2112:187-218. doi: 10.1007/978-1-0716-0270-6_14. Methods Mol Biol. 2020. PMID: 32006287 Free PMC article.
Macromolecular structure determination by NMR spectroscopy.
Markley JL, Ulrich EL, Westler WM, Volkman BF. Markley JL, et al. Among authors: ulrich el. Methods Biochem Anal. 2003;44:89-113. Methods Biochem Anal. 2003. PMID: 12647383 Review. No abstract available.
67 results