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Outcome of the First wwPDB Hybrid/Integrative Methods Task Force Workshop.
Sali A, Berman HM, Schwede T, Trewhella J, Kleywegt G, Burley SK, Markley J, Nakamura H, Adams P, Bonvin AM, Chiu W, Peraro MD, Di Maio F, Ferrin TE, Grünewald K, Gutmanas A, Henderson R, Hummer G, Iwasaki K, Johnson G, Lawson CL, Meiler J, Marti-Renom MA, Montelione GT, Nilges M, Nussinov R, Patwardhan A, Rappsilber J, Read RJ, Saibil H, Schröder GF, Schwieters CD, Seidel CA, Svergun D, Topf M, Ulrich EL, Velankar S, Westbrook JD. Sali A, et al. Structure. 2015 Jul 7;23(7):1156-67. doi: 10.1016/j.str.2015.05.013. Epub 2015 Jun 18. Structure. 2015. PMID: 26095030 Free PMC article.
Comparative protein structure modeling of genes and genomes.
Martí-Renom MA, Stuart AC, Fiser A, Sánchez R, Melo F, Sali A. Martí-Renom MA, et al. Annu Rev Biophys Biomol Struct. 2000;29:291-325. doi: 10.1146/annurev.biophys.29.1.291. Annu Rev Biophys Biomol Struct. 2000. PMID: 10940251 Review.
Protein structure modeling for structural genomics.
Sánchez R, Pieper U, Melo F, Eswar N, Martí-Renom MA, Madhusudhan MS, Mirković N, Sali A. Sánchez R, et al. Nat Struct Biol. 2000 Nov;7 Suppl:986-90. doi: 10.1038/80776. Nat Struct Biol. 2000. PMID: 11104007 Review.
DBAli: a database of protein structure alignments.
Martí-Renom MA, Ilyin VA, Sali A. Martí-Renom MA, et al. Bioinformatics. 2001 Aug;17(8):746-7. doi: 10.1093/bioinformatics/17.8.746. Bioinformatics. 2001. PMID: 11524379
Tools for comparative protein structure modeling and analysis.
Eswar N, John B, Mirkovic N, Fiser A, Ilyin VA, Pieper U, Stuart AC, Marti-Renom MA, Madhusudhan MS, Yerkovich B, Sali A. Eswar N, et al. Nucleic Acids Res. 2003 Jul 1;31(13):3375-80. doi: 10.1093/nar/gkg543. Nucleic Acids Res. 2003. PMID: 12824331 Free PMC article.
Alignment of protein sequences by their profiles.
Marti-Renom MA, Madhusudhan MS, Sali A. Marti-Renom MA, et al. Protein Sci. 2004 Apr;13(4):1071-87. doi: 10.1110/ps.03379804. Protein Sci. 2004. PMID: 15044736 Free PMC article.
125 results