Mackey AJ - Search Results

1

Systems Analysis of Adaptive Responses to MAP Kinase Pathway Blockade in BRAF Mutant Melanoma.

Capaldo BJ, Roller D, Axelrod MJ, Koeppel AF, Petricoin EF, Slingluff CL Jr, Weber MJ, Mackey AJ, Gioeli D, Bekiranov S. Capaldo BJ, et al. Among authors: mackey aj. PLoS One. 2015 Sep 25;10(9):e0138210. doi: 10.1371/journal.pone.0138210. eCollection 2015. PLoS One. 2015. PMID: 26405815 Free PMC article.

2

Combinatorial drug screening and molecular profiling reveal diverse mechanisms of intrinsic and adaptive resistance to BRAF inhibition in V600E BRAF mutant melanomas.

Roller DG, Capaldo B, Bekiranov S, Mackey AJ, Conaway MR, Petricoin EF, Gioeli D, Weber MJ. Roller DG, et al. Among authors: mackey aj. Oncotarget. 2016 Jan 19;7(3):2734-53. doi: 10.18632/oncotarget.6548. Oncotarget. 2016. PMID: 26673621 Free PMC article.

3

Synthetic lethal screening with small-molecule inhibitors provides a pathway to rational combination therapies for melanoma.

Roller DG, Axelrod M, Capaldo BJ, Jensen K, Mackey A, Weber MJ, Gioeli D. Roller DG, et al. Mol Cancer Ther. 2012 Nov;11(11):2505-15. doi: 10.1158/1535-7163.MCT-12-0461. Epub 2012 Sep 7. Mol Cancer Ther. 2012. PMID: 22962324 Free PMC article.

4

Identification of a new target of miR-16, Vacuolar Protein Sorting 4a.

Adhikari N, Guan W, Capaldo B, Mackey AJ, Carlson M, Ramakrishnan S, Walek D, Gupta M, Mitchell A, Eckman P, John R, Ashley E, Barton PJ, Hall JL. Adhikari N, et al. Among authors: mackey aj. PLoS One. 2014 Jul 17;9(7):e101509. doi: 10.1371/journal.pone.0101509. eCollection 2014. PLoS One. 2014. PMID: 25033200 Free PMC article.

5

Assessing performance of orthology detection strategies applied to eukaryotic genomes.

Chen F, Mackey AJ, Vermunt JK, Roos DS. Chen F, et al. Among authors: mackey aj. PLoS One. 2007 Apr 18;2(4):e383. doi: 10.1371/journal.pone.0000383. PLoS One. 2007. PMID: 17440619 Free PMC article.

6

Using SQL Databases for Sequence Similarity Searching and Analysis.

Pearson WR, Mackey AJ. Pearson WR, et al. Among authors: mackey aj. Curr Protoc Bioinformatics. 2017 Sep 13;59:9.4.1-9.4.22. doi: 10.1002/cpbi.32. Curr Protoc Bioinformatics. 2017. PMID: 28902397

7

Fine-scale patterns of population stratification confound rare variant association tests.

O'Connor TD, Kiezun A, Bamshad M, Rich SS, Smith JD, Turner E; NHLBIGO Exome Sequencing Project; ESP Population Genetics, Statistical Analysis Working Group; Leal SM, Akey JM. O'Connor TD, et al. PLoS One. 2013 Jul 4;8(7):e65834. doi: 10.1371/journal.pone.0065834. Print 2013. PLoS One. 2013. PMID: 23861739 Free PMC article.

8

Using relational databases for improved sequence similarity searching and large-scale genomic analyses.

Mackey AJ, Pearson WR. Mackey AJ, et al. Curr Protoc Bioinformatics. 2004 Oct;Chapter 9:Unit 9.4. doi: 10.1002/0471250953.bi0904s7. Curr Protoc Bioinformatics. 2004. PMID: 18428739

9

Global changes in gene expression during compatible and incompatible interactions of cowpea (Vigna unguiculata L.) with the root parasitic angiosperm Striga gesnerioides.

Huang K, Mellor KE, Paul SN, Lawson MJ, Mackey AJ, Timko MP. Huang K, et al. Among authors: mackey aj. BMC Genomics. 2012 Aug 17;13:402. doi: 10.1186/1471-2164-13-402. BMC Genomics. 2012. PMID: 22900582 Free PMC article.

10

OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups.

Chen F, Mackey AJ, Stoeckert CJ Jr, Roos DS. Chen F, et al. Among authors: mackey aj. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D363-8. doi: 10.1093/nar/gkj123. Nucleic Acids Res. 2006. PMID: 16381887 Free PMC article.

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