Berger B - Search Results

1

Calibrating the Human Mutation Rate via Ancestral Recombination Density in Diploid Genomes.

Lipson M, Loh PR, Sankararaman S, Patterson N, Berger B, Reich D. Lipson M, et al. Among authors: berger b. PLoS Genet. 2015 Nov 12;11(11):e1005550. doi: 10.1371/journal.pgen.1005550. eCollection 2015 Nov. PLoS Genet. 2015. PMID: 26562831 Free PMC article.

2

Methods in comparative genomics: genome correspondence, gene identification and regulatory motif discovery.

Kellis M, Patterson N, Birren B, Berger B, Lander ES. Kellis M, et al. Among authors: berger b. J Comput Biol. 2004;11(2-3):319-55. doi: 10.1089/1066527041410319. J Comput Biol. 2004. PMID: 15285895 Free article.

3

Building quantitative prediction models for tissue residue of two explosives compounds in earthworms from microarray gene expression data.

Gong P, Loh PR, Barker ND, Tucker G, Wang N, Zhang C, Escalon BL, Berger B, Perkins EJ. Gong P, et al. Among authors: berger b. Environ Sci Technol. 2012 Jan 3;46(1):19-26. doi: 10.1021/es201187u. Epub 2011 Aug 8. Environ Sci Technol. 2012. PMID: 21776976

4

Phenotype prediction using regularized regression on genetic data in the DREAM5 Systems Genetics B Challenge.

Loh PR, Tucker G, Berger B. Loh PR, et al. Among authors: berger b. PLoS One. 2011;6(12):e29095. doi: 10.1371/journal.pone.0029095. Epub 2011 Dec 28. PLoS One. 2011. PMID: 22216175 Free PMC article.

5

Assessing statistical significance in causal graphs.

Chindelevitch L, Loh PR, Enayetallah A, Berger B, Ziemek D. Chindelevitch L, et al. Among authors: berger b. BMC Bioinformatics. 2012 Feb 20;13:35. doi: 10.1186/1471-2105-13-35. BMC Bioinformatics. 2012. PMID: 22348444 Free PMC article.

6

Compressive genomics.

Loh PR, Baym M, Berger B. Loh PR, et al. Among authors: berger b. Nat Biotechnol. 2012 Jul 10;30(7):627-30. doi: 10.1038/nbt.2241. Nat Biotechnol. 2012. PMID: 22781691 No abstract available.

7

The genetic prehistory of southern Africa.

Pickrell JK, Patterson N, Barbieri C, Berthold F, Gerlach L, Güldemann T, Kure B, Mpoloka SW, Nakagawa H, Naumann C, Lipson M, Loh PR, Lachance J, Mountain J, Bustamante CD, Berger B, Tishkoff SA, Henn BM, Stoneking M, Reich D, Pakendorf B. Pickrell JK, et al. Among authors: berger b. Nat Commun. 2012;3:1143. doi: 10.1038/ncomms2140. Nat Commun. 2012. PMID: 23072811 Free PMC article.

8

Inferring admixture histories of human populations using linkage disequilibrium.

Loh PR, Lipson M, Patterson N, Moorjani P, Pickrell JK, Reich D, Berger B. Loh PR, et al. Among authors: berger b. Genetics. 2013 Apr;193(4):1233-54. doi: 10.1534/genetics.112.147330. Epub 2013 Feb 14. Genetics. 2013. PMID: 23410830 Free PMC article.

9

Reconstructing Roma history from genome-wide data.

Moorjani P, Patterson N, Loh PR, Lipson M, Kisfali P, Melegh BI, Bonin M, Kádaši L, Rieß O, Berger B, Reich D, Melegh B. Moorjani P, et al. Among authors: berger b. PLoS One. 2013;8(3):e58633. doi: 10.1371/journal.pone.0058633. Epub 2013 Mar 13. PLoS One. 2013. PMID: 23516520 Free PMC article.

10

Efficient moment-based inference of admixture parameters and sources of gene flow.

Lipson M, Loh PR, Levin A, Reich D, Patterson N, Berger B. Lipson M, et al. Among authors: berger b. Mol Biol Evol. 2013 Aug;30(8):1788-802. doi: 10.1093/molbev/mst099. Epub 2013 May 24. Mol Biol Evol. 2013. PMID: 23709261 Free PMC article.

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