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Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the continuing case for reference genome sequencing.
Greninger AL, Messacar K, Dunnebacke T, Naccache SN, Federman S, Bouquet J, Mirsky D, Nomura Y, Yagi S, Glaser C, Vollmer M, Press CA, Kleinschmidt-DeMasters BK, Dominguez SR, Chiu CY. Greninger AL, et al. Genome Med. 2015 Dec 1;7:113. doi: 10.1186/s13073-015-0235-2. Genome Med. 2015. PMID: 26620704 Free PMC article.
Identification of cardioviruses related to Theiler's murine encephalomyelitis virus in human infections.
Chiu CY, Greninger AL, Kanada K, Kwok T, Fischer KF, Runckel C, Louie JK, Glaser CA, Yagi S, Schnurr DP, Haggerty TD, Parsonnet J, Ganem D, DeRisi JL. Chiu CY, et al. Among authors: greninger al. Proc Natl Acad Sci U S A. 2008 Sep 16;105(37):14124-9. doi: 10.1073/pnas.0805968105. Epub 2008 Sep 3. Proc Natl Acad Sci U S A. 2008. PMID: 18768820 Free PMC article.
Discovery of a novel polyomavirus in acute diarrheal samples from children.
Yu G, Greninger AL, Isa P, Phan TG, Martínez MA, de la Luz Sanchez M, Contreras JF, Santos-Preciado JI, Parsonnet J, Miller S, DeRisi JL, Delwart E, Arias CF, Chiu CY. Yu G, et al. Among authors: greninger al. PLoS One. 2012;7(11):e49449. doi: 10.1371/journal.pone.0049449. Epub 2012 Nov 14. PLoS One. 2012. PMID: 23166671 Free PMC article.
A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples.
Naccache SN, Federman S, Veeraraghavan N, Zaharia M, Lee D, Samayoa E, Bouquet J, Greninger AL, Luk KC, Enge B, Wadford DA, Messenger SL, Genrich GL, Pellegrino K, Grard G, Leroy E, Schneider BS, Fair JN, Martínez MA, Isa P, Crump JA, DeRisi JL, Sittler T, Hackett J Jr, Miller S, Chiu CY. Naccache SN, et al. Among authors: greninger al. Genome Res. 2014 Jul;24(7):1180-92. doi: 10.1101/gr.171934.113. Epub 2014 Jun 4. Genome Res. 2014. PMID: 24899342 Free PMC article.
357 results