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Dealing with dimensionality: the application of machine learning to multi-omics data.
Feldner-Busztin D, Firbas Nisantzis P, Edmunds SJ, Boza G, Racimo F, Gopalakrishnan S, Limborg MT, Lahti L, de Polavieja GG. Feldner-Busztin D, et al. Among authors: racimo f. Bioinformatics. 2023 Feb 3;39(2):btad021. doi: 10.1093/bioinformatics/btad021. Bioinformatics. 2023. PMID: 36637211 Free PMC article.
Reply to: When did mammoths go extinct?
Wang Y, Prohaska A, Dong H, Alberti A, Alsos IG, Beilman DW, Bjørk AA, Cao J, Cherezova AA, Coissac E, De Sanctis B, Denoeud F, Dockter C, Durbin R, Edwards ME, Edwards NR, Esdale J, Fedorov GB, Fernandez-Guerra A, Froese DG, Gusarova G, Haile J, Holden PB, Kjeldsen KK, Kjær KH, Korneliussen TS, Lammers Y, Larsen NK, Macleod R, Mangerud J, McColl H, Merkel MKF, Money D, Möller P, Nogués-Bravo D, Orlando L, Owens HL, Pedersen MW, Racimo F, Rahbek C, Rasic JT, Rouillard A, Ruter AH, Skadhauge B, Svendsen JI, Tikhonov A, Vinner L, Wincker P, Xing Y, Zhang Y, Meltzer DJ, Willerslev E. Wang Y, et al. Among authors: racimo f. Nature. 2022 Dec;612(7938):E4-E6. doi: 10.1038/s41586-022-05417-2. Nature. 2022. PMID: 36450908 Free PMC article. No abstract available.
A high-coverage genome sequence from an archaic Denisovan individual.
Meyer M, Kircher M, Gansauge MT, Li H, Racimo F, Mallick S, Schraiber JG, Jay F, Prüfer K, de Filippo C, Sudmant PH, Alkan C, Fu Q, Do R, Rohland N, Tandon A, Siebauer M, Green RE, Bryc K, Briggs AW, Stenzel U, Dabney J, Shendure J, Kitzman J, Hammer MF, Shunkov MV, Derevianko AP, Patterson N, Andrés AM, Eichler EE, Slatkin M, Reich D, Kelso J, Pääbo S. Meyer M, et al. Among authors: racimo f. Science. 2012 Oct 12;338(6104):222-6. doi: 10.1126/science.1224344. Epub 2012 Aug 30. Science. 2012. PMID: 22936568 Free PMC article.
The complete genome sequence of a Neanderthal from the Altai Mountains.
Prüfer K, Racimo F, Patterson N, Jay F, Sankararaman S, Sawyer S, Heinze A, Renaud G, Sudmant PH, de Filippo C, Li H, Mallick S, Dannemann M, Fu Q, Kircher M, Kuhlwilm M, Lachmann M, Meyer M, Ongyerth M, Siebauer M, Theunert C, Tandon A, Moorjani P, Pickrell J, Mullikin JC, Vohr SH, Green RE, Hellmann I, Johnson PL, Blanche H, Cann H, Kitzman JO, Shendure J, Eichler EE, Lein ES, Bakken TE, Golovanova LV, Doronichev VB, Shunkov MV, Derevianko AP, Viola B, Slatkin M, Reich D, Kelso J, Pääbo S. Prüfer K, et al. Among authors: racimo f. Nature. 2014 Jan 2;505(7481):43-9. doi: 10.1038/nature12886. Epub 2013 Dec 18. Nature. 2014. PMID: 24352235 Free PMC article.
Patterns of coding variation in the complete exomes of three Neandertals.
Castellano S, Parra G, Sánchez-Quinto FA, Racimo F, Kuhlwilm M, Kircher M, Sawyer S, Fu Q, Heinze A, Nickel B, Dabney J, Siebauer M, White L, Burbano HA, Renaud G, Stenzel U, Lalueza-Fox C, de la Rasilla M, Rosas A, Rudan P, Brajković D, Kucan Ž, Gušic I, Shunkov MV, Derevianko AP, Viola B, Meyer M, Kelso J, Andrés AM, Pääbo S. Castellano S, et al. Among authors: racimo f. Proc Natl Acad Sci U S A. 2014 May 6;111(18):6666-71. doi: 10.1073/pnas.1405138111. Epub 2014 Apr 21. Proc Natl Acad Sci U S A. 2014. PMID: 24753607 Free PMC article.
Evidence for archaic adaptive introgression in humans.
Racimo F, Sankararaman S, Nielsen R, Huerta-Sánchez E. Racimo F, et al. Nat Rev Genet. 2015 Jun;16(6):359-71. doi: 10.1038/nrg3936. Epub 2015 May 12. Nat Rev Genet. 2015. PMID: 25963373 Free PMC article. Review.
58 results