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Evidence for Host-Bacterial Co-evolution via Genome Sequence Analysis of 480 Thai Mycobacterium tuberculosis Lineage 1 Isolates.
Palittapongarnpim P, Ajawatanawong P, Viratyosin W, Smittipat N, Disratthakit A, Mahasirimongkol S, Yanai H, Yamada N, Nedsuwan S, Imasanguan W, Kantipong P, Chaiyasirinroje B, Wongyai J, Toyo-Oka L, Phelan J, Parkhill J, Clark TG, Hibberd ML, Ruengchai W, Palittapongarnpim P, Juthayothin T, Tongsima S, Tokunaga K. Palittapongarnpim P, et al. Among authors: clark tg. Sci Rep. 2018 Aug 2;8(1):11597. doi: 10.1038/s41598-018-29986-3. Sci Rep. 2018. PMID: 30072734 Free PMC article.
A novel Ancestral Beijing sublineage of Mycobacterium tuberculosis suggests the transition site to Modern Beijing sublineages.
Ajawatanawong P, Yanai H, Smittipat N, Disratthakit A, Yamada N, Miyahara R, Nedsuwan S, Imasanguan W, Kantipong P, Chaiyasirinroje B, Wongyai J, Plitphonganphim S, Tantivitayakul P, Phelan J, Parkhill J, Clark TG, Hibberd ML, Ruangchai W, Palittapongarnpim P, Juthayothin T, Thawornwattana Y, Viratyosin W, Tongsima S, Mahasirimongkol S, Tokunaga K, Palittapongarnpim P. Ajawatanawong P, et al. Among authors: clark tg. Sci Rep. 2019 Sep 23;9(1):13718. doi: 10.1038/s41598-019-50078-3. Sci Rep. 2019. PMID: 31548561 Free PMC article.
Genomic evidence supporting the clonal expansion of extensively drug-resistant tuberculosis bacteria belonging to a rare proto-Beijing genotype.
Srilohasin P, Prammananan T, Faksri K, Phelan JE, Suriyaphol P, Kamolwat P, Smithtikarn S, Disratthakit A, Regmi SM, Leechawengwongs M, Twee-Hee Ong R, Teo YY, Tongsima S, Clark TG, Chaiprasert A. Srilohasin P, et al. Among authors: clark tg. Emerg Microbes Infect. 2020 Dec;9(1):2632-2641. doi: 10.1080/22221751.2020.1852891. Emerg Microbes Infect. 2020. PMID: 33205698 Free PMC article.
Clusters of Drug-Resistant Mycobacterium tuberculosis Detected by Whole-Genome Sequence Analysis of Nationwide Sample, Thailand, 2014-2017.
Nonghanphithak D, Chaiprasert A, Smithtikarn S, Kamolwat P, Pungrassami P, Chongsuvivatwong V, Mahasirimongkol S, Reechaipichitkul W, Leepiyasakulchai C, Phelan JE, Blair D, Clark TG, Faksri K. Nonghanphithak D, et al. Among authors: clark tg. Emerg Infect Dis. 2021 Mar;27(3):813-822. doi: 10.3201/eid2703.204364. Emerg Infect Dis. 2021. PMID: 33622486 Free PMC article.
High clustering rate and genotypic drug-susceptibility screening for the newly recommended anti-tuberculosis drugs among global extensively drug-resistant Mycobacterium tuberculosis isolates.
Trisakul K, Nonghanphithak D, Chaiyachat P, Kaewprasert O, Sakmongkoljit K, Reechaipichitkul W, Chaiprasert A, Blair D, Clark TG, Faksri K. Trisakul K, et al. Among authors: clark tg. Emerg Microbes Infect. 2022 Dec;11(1):1857-1866. doi: 10.1080/22221751.2022.2099304. Emerg Microbes Infect. 2022. PMID: 35792049 Free PMC article.
Genome-wide host-pathogen analyses reveal genetic interaction points in tuberculosis disease.
Phelan J, Gomez-Gonzalez PJ, Andreu N, Omae Y, Toyo-Oka L, Yanai H, Miyahara R, Nedsuwan S, de Sessions PF, Campino S, Sallah N, Parkhill J, Smittipat N, Palittapongarnpim P, Mushiroda T, Kubo M, Tokunaga K, Mahasirimongkol S, Hibberd ML, Clark TG. Phelan J, et al. Among authors: clark tg. Nat Commun. 2023 Feb 1;14(1):549. doi: 10.1038/s41467-023-36282-w. Nat Commun. 2023. PMID: 36725857 Free PMC article.
Elucidating emergence and transmission of multidrug-resistant tuberculosis in treatment experienced patients by whole genome sequencing.
Clark TG, Mallard K, Coll F, Preston M, Assefa S, Harris D, Ogwang S, Mumbowa F, Kirenga B, O'Sullivan DM, Okwera A, Eisenach KD, Joloba M, Bentley SD, Ellner JJ, Parkhill J, Jones-López EC, McNerney R. Clark TG, et al. PLoS One. 2013 Dec 11;8(12):e83012. doi: 10.1371/journal.pone.0083012. eCollection 2013. PLoS One. 2013. PMID: 24349420 Free PMC article. Clinical Trial.
Recurrence due to relapse or reinfection with Mycobacterium tuberculosis: a whole-genome sequencing approach in a large, population-based cohort with a high HIV infection prevalence and active follow-up.
Guerra-Assunção JA, Houben RM, Crampin AC, Mzembe T, Mallard K, Coll F, Khan P, Banda L, Chiwaya A, Pereira RP, McNerney R, Harris D, Parkhill J, Clark TG, Glynn JR. Guerra-Assunção JA, et al. Among authors: clark tg. J Infect Dis. 2015 Apr 1;211(7):1154-63. doi: 10.1093/infdis/jiu574. Epub 2014 Oct 21. J Infect Dis. 2015. PMID: 25336729 Free PMC article.
368 results