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Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer.
Zhang H, Liu T, Zhang Z, Payne SH, Zhang B, McDermott JE, Zhou JY, Petyuk VA, Chen L, Ray D, Sun S, Yang F, Chen L, Wang J, Shah P, Cha SW, Aiyetan P, Woo S, Tian Y, Gritsenko MA, Clauss TR, Choi C, Monroe ME, Thomas S, Nie S, Wu C, Moore RJ, Yu KH, Tabb DL, Fenyö D, Bafna V, Wang Y, Rodriguez H, Boja ES, Hiltke T, Rivers RC, Sokoll L, Zhu H, Shih IM, Cope L, Pandey A, Zhang B, Snyder MP, Levine DA, Smith RD, Chan DW, Rodland KD; CPTAC Investigators. Zhang H, et al. Among authors: bafna v. Cell. 2016 Jul 28;166(3):755-765. doi: 10.1016/j.cell.2016.05.069. Epub 2016 Jun 29. Cell. 2016. PMID: 27372738 Free PMC article.
Discovery and revision of Arabidopsis genes by proteogenomics.
Castellana NE, Payne SH, Shen Z, Stanke M, Bafna V, Briggs SP. Castellana NE, et al. Among authors: bafna v. Proc Natl Acad Sci U S A. 2008 Dec 30;105(52):21034-8. doi: 10.1073/pnas.0811066106. Epub 2008 Dec 19. Proc Natl Acad Sci U S A. 2008. PMID: 19098097 Free PMC article.
Protein identification using top-down.
Liu X, Sirotkin Y, Shen Y, Anderson G, Tsai YS, Ting YS, Goodlett DR, Smith RD, Bafna V, Pevzner PA. Liu X, et al. Among authors: bafna v. Mol Cell Proteomics. 2012 Jun;11(6):M111.008524. doi: 10.1074/mcp.M111.008524. Epub 2011 Oct 25. Mol Cell Proteomics. 2012. PMID: 22027200 Free PMC article.
Combinatorics of the breakage-fusion-bridge mechanism.
Kinsella M, Bafna V. Kinsella M, et al. Among authors: bafna v. J Comput Biol. 2012 Jun;19(6):662-78. doi: 10.1089/cmb.2012.0020. Epub 2012 Apr 16. J Comput Biol. 2012. PMID: 22506505 Free PMC article.
193 results