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Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop.
Jagodnik KM, Koplev S, Jenkins SL, Ohno-Machado L, Paten B, Schurer SC, Dumontier M, Verborgh R, Bui A, Ping P, McKenna NJ, Madduri R, Pillai A, Ma'ayan A. Jagodnik KM, et al. Among authors: madduri r. J Biomed Inform. 2017 Jul;71:49-57. doi: 10.1016/j.jbi.2017.05.006. Epub 2017 May 10. J Biomed Inform. 2017. PMID: 28501646 Free PMC article.
FAIR for AI: An interdisciplinary and international community building perspective.
Huerta EA, Blaiszik B, Brinson LC, Bouchard KE, Diaz D, Doglioni C, Duarte JM, Emani M, Foster I, Fox G, Harris P, Heinrich L, Jha S, Katz DS, Kindratenko V, Kirkpatrick CR, Lassila-Perini K, Madduri RK, Neubauer MS, Psomopoulos FE, Roy A, Rübel O, Zhao Z, Zhu R. Huerta EA, et al. Among authors: madduri rk. Sci Data. 2023 Jul 26;10(1):487. doi: 10.1038/s41597-023-02298-6. Sci Data. 2023. PMID: 37495591 Free PMC article.
Big biomedical data as the key resource for discovery science.
Toga AW, Foster I, Kesselman C, Madduri R, Chard K, Deutsch EW, Price ND, Glusman G, Heavner BD, Dinov ID, Ames J, Van Horn J, Kramer R, Hood L. Toga AW, et al. Among authors: madduri r. J Am Med Inform Assoc. 2015 Nov;22(6):1126-31. doi: 10.1093/jamia/ocv077. Epub 2015 Jul 21. J Am Med Inform Assoc. 2015. PMID: 26198305 Free PMC article.
caGrid 1.0: an enterprise Grid infrastructure for biomedical research.
Oster S, Langella S, Hastings S, Ervin D, Madduri R, Phillips J, Kurc T, Siebenlist F, Covitz P, Shanbhag K, Foster I, Saltz J. Oster S, et al. Among authors: madduri r. J Am Med Inform Assoc. 2008 Mar-Apr;15(2):138-49. doi: 10.1197/jamia.M2522. Epub 2007 Dec 20. J Am Med Inform Assoc. 2008. PMID: 18096909 Free PMC article.
A roadmap for caGrid, an enterprise Grid architecture for biomedical research.
Saltz J, Hastings S, Langella S, Oster S, Kurc T, Payne P, Ferreira R, Plale B, Goble C, Ervin D, Sharma A, Pan T, Permar J, Brezany P, Siebenlist F, Madduri R, Foster I, Shanbhag K, Mead C, Chue Hong N. Saltz J, et al. Among authors: madduri r. Stud Health Technol Inform. 2008;138:224-37. Stud Health Technol Inform. 2008. PMID: 18560123 Free PMC article.
Enabling collaborative research using the Biomedical Informatics Research Network (BIRN).
Helmer KG, Ambite JL, Ames J, Ananthakrishnan R, Burns G, Chervenak AL, Foster I, Liming L, Keator D, Macciardi F, Madduri R, Navarro JP, Potkin S, Rosen B, Ruffins S, Schuler R, Turner JA, Toga A, Williams C, Kesselman C; Biomedical Informatics Research Network. Helmer KG, et al. Among authors: madduri r. J Am Med Inform Assoc. 2011 Jul-Aug;18(4):416-22. doi: 10.1136/amiajnl-2010-000032. Epub 2011 Apr 22. J Am Med Inform Assoc. 2011. PMID: 21515543 Free PMC article.
Reproducible big data science: A case study in continuous FAIRness.
Madduri R, Chard K, D'Arcy M, Jung SC, Rodriguez A, Sulakhe D, Deutsch E, Funk C, Heavner B, Richards M, Shannon P, Glusman G, Price N, Kesselman C, Foster I. Madduri R, et al. PLoS One. 2019 Apr 11;14(4):e0213013. doi: 10.1371/journal.pone.0213013. eCollection 2019. PLoS One. 2019. PMID: 30973881 Free PMC article.
caGrid 1.0: a Grid enterprise architecture for cancer research.
Oster S, Langella S, Hastings S, Ervin D, Madduri R, Kurc T, Siebenlist F, Covitz P, Shanbhag K, Foster I, Saltz J. Oster S, et al. Among authors: madduri r. AMIA Annu Symp Proc. 2007 Oct 11;2007:573-7. AMIA Annu Symp Proc. 2007. PMID: 18693901 Free PMC article.
57 results