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Adaptive Immune Receptor Repertoire Community recommendations for sharing immune-repertoire sequencing data.
Rubelt F, Busse CE, Bukhari SAC, Bürckert JP, Mariotti-Ferrandiz E, Cowell LG, Watson CT, Marthandan N, Faison WJ, Hershberg U, Laserson U, Corrie BD, Davis MM, Peters B, Lefranc MP, Scott JK, Breden F; AIRR Community; Luning Prak ET, Kleinstein SH. Rubelt F, et al. Among authors: kleinstein sh. Nat Immunol. 2017 Nov 16;18(12):1274-1278. doi: 10.1038/ni.3873. Nat Immunol. 2017. PMID: 29144493 Free PMC article.
Antiviral response dictated by choreographed cascade of transcription factors.
Zaslavsky E, Hershberg U, Seto J, Pham AM, Marquez S, Duke JL, Wetmur JG, Tenoever BR, Sealfon SC, Kleinstein SH. Zaslavsky E, et al. Among authors: kleinstein sh. J Immunol. 2010 Mar 15;184(6):2908-17. doi: 10.4049/jimmunol.0903453. Epub 2010 Feb 17. J Immunol. 2010. PMID: 20164420 Free PMC article.
Detecting selection in immunoglobulin sequences.
Uduman M, Yaari G, Hershberg U, Stern JA, Shlomchik MJ, Kleinstein SH. Uduman M, et al. Among authors: kleinstein sh. Nucleic Acids Res. 2011 Jul;39(Web Server issue):W499-504. doi: 10.1093/nar/gkr413. Epub 2011 Jun 10. Nucleic Acids Res. 2011. PMID: 21665923 Free PMC article.
Biomedical model fitting and error analysis.
Costa KD, Kleinstein SH, Hershberg U. Costa KD, et al. Among authors: kleinstein sh. Sci Signal. 2011 Sep 20;4(192):tr9. doi: 10.1126/scisignal.2001983. Sci Signal. 2011. PMID: 21954296 Free PMC article.
NLRP10 is a NOD-like receptor essential to initiate adaptive immunity by dendritic cells.
Eisenbarth SC, Williams A, Colegio OR, Meng H, Strowig T, Rongvaux A, Henao-Mejia J, Thaiss CA, Joly S, Gonzalez DG, Xu L, Zenewicz LA, Haberman AM, Elinav E, Kleinstein SH, Sutterwala FS, Flavell RA. Eisenbarth SC, et al. Among authors: kleinstein sh. Nature. 2012 Apr 25;484(7395):510-3. doi: 10.1038/nature11012. Nature. 2012. PMID: 22538615 Free PMC article.
Models of somatic hypermutation targeting and substitution based on synonymous mutations from high-throughput immunoglobulin sequencing data.
Yaari G, Vander Heiden JA, Uduman M, Gadala-Maria D, Gupta N, Stern JN, O'Connor KC, Hafler DA, Laserson U, Vigneault F, Kleinstein SH. Yaari G, et al. Among authors: kleinstein sh. Front Immunol. 2013 Nov 15;4:358. doi: 10.3389/fimmu.2013.00358. eCollection 2013. Front Immunol. 2013. PMID: 24298272 Free PMC article.
185 results