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BALDR: a computational pipeline for paired heavy and light chain immunoglobulin reconstruction in single-cell RNA-seq data.
Upadhyay AA, Kauffman RC, Wolabaugh AN, Cho A, Patel NB, Reiss SM, Havenar-Daughton C, Dawoud RA, Tharp GK, Sanz I, Pulendran B, Crotty S, Lee FE, Wrammert J, Bosinger SE. Upadhyay AA, et al. Among authors: kauffman rc. Genome Med. 2018 Mar 20;10(1):20. doi: 10.1186/s13073-018-0528-3. Genome Med. 2018. PMID: 29558968 Free PMC article.
Single-Cell Analysis Suggests that Ongoing Affinity Maturation Drives the Emergence of Pemphigus Vulgaris Autoimmune Disease.
Cho A, Caldara AL, Ran NA, Menne Z, Kauffman RC, Affer M, Llovet A, Norwood C, Scanlan A, Mantus G, Bradley B, Zimmer S, Schmidt T, Hertl M, Payne AS, Feldman R, Kowalczyk AP, Wrammert J. Cho A, et al. Among authors: kauffman rc. Cell Rep. 2019 Jul 23;28(4):909-922.e6. doi: 10.1016/j.celrep.2019.06.066. Cell Rep. 2019. PMID: 31340153 Free PMC article.
Evaluation of Cellular and Serological Responses to Acute SARS-CoV-2 Infection Demonstrates the Functional Importance of the Receptor-Binding Domain.
Mantus G, Nyhoff LE, Kauffman RC, Edara VV, Lai L, Floyd K, Shi PY, Menachery VD, Edupuganti S, Scherer EM, Kay A, McNair N, Anderson EJ, Rouphael N, Ahmed R, Suthar MS, Wrammert J. Mantus G, et al. Among authors: kauffman rc. J Immunol. 2021 Jun 1;206(11):2605-2613. doi: 10.4049/jimmunol.2001420. Epub 2021 May 5. J Immunol. 2021. PMID: 33952616 Free PMC article.
Single-Cell Analysis of the Plasmablast Response to Vibrio cholerae Demonstrates Expansion of Cross-Reactive Memory B Cells.
Kauffman RC, Bhuiyan TR, Nakajima R, Mayo-Smith LM, Rashu R, Hoq MR, Chowdhury F, Khan AI, Rahman A, Bhaumik SK, Harris L, O'Neal JT, Trost JF, Alam NH, Jasinskas A, Dotsey E, Kelly M, Charles RC, Xu P, Kováč P, Calderwood SB, Ryan ET, Felgner PL, Qadri F, Wrammert J, Harris JB. Kauffman RC, et al. mBio. 2016 Dec 20;7(6):e02021-16. doi: 10.1128/mBio.02021-16. mBio. 2016. PMID: 27999163 Free PMC article.
Cross-Reactive Dengue Virus Antibodies Augment Zika Virus Infection of Human Placental Macrophages.
Zimmerman MG, Quicke KM, O'Neal JT, Arora N, Machiah D, Priyamvada L, Kauffman RC, Register E, Adekunle O, Swieboda D, Johnson EL, Cordes S, Haddad L, Chakraborty R, Coyne CB, Wrammert J, Suthar MS. Zimmerman MG, et al. Among authors: kauffman rc. Cell Host Microbe. 2018 Nov 14;24(5):731-742.e6. doi: 10.1016/j.chom.2018.10.008. Cell Host Microbe. 2018. PMID: 30439342 Free PMC article.
20 results