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Page 1
Genomic Epidemiology Reconstructs the Introduction and Spread of Zika Virus in Central America and Mexico.
Thézé J, Li T, du Plessis L, Bouquet J, Kraemer MUG, Somasekar S, Yu G, de Cesare M, Balmaseda A, Kuan G, Harris E, Wu CH, Ansari MA, Bowden R, Faria NR, Yagi S, Messenger S, Brooks T, Stone M, Bloch EM, Busch M, Muñoz-Medina JE, González-Bonilla CR, Wolinsky S, López S, Arias CF, Bonsall D, Chiu CY, Pybus OG. Thézé J, et al. Among authors: messenger s. Cell Host Microbe. 2018 Jun 13;23(6):855-864.e7. doi: 10.1016/j.chom.2018.04.017. Epub 2018 May 24. Cell Host Microbe. 2018. PMID: 29805095 Free PMC article.
A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples.
Naccache SN, Federman S, Veeraraghavan N, Zaharia M, Lee D, Samayoa E, Bouquet J, Greninger AL, Luk KC, Enge B, Wadford DA, Messenger SL, Genrich GL, Pellegrino K, Grard G, Leroy E, Schneider BS, Fair JN, Martínez MA, Isa P, Crump JA, DeRisi JL, Sittler T, Hackett J Jr, Miller S, Chiu CY. Naccache SN, et al. Among authors: messenger sl. Genome Res. 2014 Jul;24(7):1180-92. doi: 10.1101/gr.171934.113. Epub 2014 Jun 4. Genome Res. 2014. PMID: 24899342 Free PMC article.
A novel outbreak enterovirus D68 strain associated with acute flaccid myelitis cases in the USA (2012-14): a retrospective cohort study.
Greninger AL, Naccache SN, Messacar K, Clayton A, Yu G, Somasekar S, Federman S, Stryke D, Anderson C, Yagi S, Messenger S, Wadford D, Xia D, Watt JP, Van Haren K, Dominguez SR, Glaser C, Aldrovandi G, Chiu CY. Greninger AL, et al. Among authors: messenger s. Lancet Infect Dis. 2015 Jun;15(6):671-82. doi: 10.1016/S1473-3099(15)70093-9. Epub 2015 Mar 31. Lancet Infect Dis. 2015. PMID: 25837569 Free PMC article.
Diagnosis of Fatal Human Case of St. Louis Encephalitis Virus Infection by Metagenomic Sequencing, California, 2016.
Chiu CY, Coffey LL, Murkey J, Symmes K, Sample HA, Wilson MR, Naccache SN, Arevalo S, Somasekar S, Federman S, Stryke D, Vespa P, Schiller G, Messenger S, Humphries R, Miller S, Klausner JD. Chiu CY, et al. Among authors: messenger s. Emerg Infect Dis. 2017 Oct;23(10):1964-1968. doi: 10.3201/eid2310.161986. Emerg Infect Dis. 2017. PMID: 28930022 Free PMC article.
Metagenomic sequencing with spiked primer enrichment for viral diagnostics and genomic surveillance.
Deng X, Achari A, Federman S, Yu G, Somasekar S, Bártolo I, Yagi S, Mbala-Kingebeni P, Kapetshi J, Ahuka-Mundeke S, Muyembe-Tamfum JJ, Ahmed AA, Ganesh V, Tamhankar M, Patterson JL, Ndembi N, Mbanya D, Kaptue L, McArthur C, Muñoz-Medina JE, Gonzalez-Bonilla CR, López S, Arias CF, Arevalo S, Miller S, Stone M, Busch M, Hsieh K, Messenger S, Wadford DA, Rodgers M, Cloherty G, Faria NR, Thézé J, Pybus OG, Neto Z, Morais J, Taveira N, R Hackett J Jr, Chiu CY. Deng X, et al. Among authors: messenger s. Nat Microbiol. 2020 Mar;5(3):443-454. doi: 10.1038/s41564-019-0637-9. Epub 2020 Jan 13. Nat Microbiol. 2020. PMID: 31932713 Free PMC article.
Author Correction: Metagenomic sequencing with spiked primer enrichment for viral diagnostics and genomic surveillance.
Deng X, Achari A, Federman S, Yu G, Somasekar S, Bártolo I, Yagi S, Mbala-Kingebeni P, Kapetshi J, Ahuka-Mundeke S, Muyembe-Tamfum JJ, Ahmed AA, Ganesh V, Tamhankar M, Patterson JL, Ndembi N, Mbanya D, Kaptue L, McArthur C, Muñoz-Medina JE, Gonzalez-Bonilla CR, López S, Arias CF, Arevalo S, Miller S, Stone M, Busch M, Hsieh K, Messenger S, Wadford DA, Rodgers M, Cloherty G, Faria NR, Thézé J, Pybus OG, Neto Z, Morais J, Taveira N, Hackett JR Jr, Chiu CY. Deng X, et al. Among authors: messenger s. Nat Microbiol. 2020 Mar;5(3):525. doi: 10.1038/s41564-020-0671-7. Nat Microbiol. 2020. PMID: 31965087 Free PMC article.
Rhinovirus associated with severe lower respiratory tract infections in children.
Louie JK, Roy-Burman A, Guardia-Labar L, Boston EJ, Kiang D, Padilla T, Yagi S, Messenger S, Petru AM, Glaser CA, Schnurr DP. Louie JK, et al. Among authors: messenger s. Pediatr Infect Dis J. 2009 Apr;28(4):337-9. doi: 10.1097/INF.0b013e31818ffc1b. Pediatr Infect Dis J. 2009. PMID: 19258921
West Nile virus in California, 2003-2018: A persistent threat.
Snyder RE, Feiszli T, Foss L, Messenger S, Fang Y, Barker CM, Reisen WK, Vugia DJ, Padgett KA, Kramer VL. Snyder RE, et al. Among authors: messenger s. PLoS Negl Trop Dis. 2020 Nov 18;14(11):e0008841. doi: 10.1371/journal.pntd.0008841. eCollection 2020 Nov. PLoS Negl Trop Dis. 2020. PMID: 33206634 Free PMC article.
Fatal transplant-associated west nile virus encephalitis and public health investigation-california, 2010.
Rabe IB, Schwartz BS, Farnon EC, Josephson SA, Webber AB, Roberts JP, de Mattos AM, Gallay BJ, van Slyck S, Messenger SL, Yen CJ, Bloch EM, Drew CP, Fischer M, Glaser CA; WNV Transplant Investigation Team. Rabe IB, et al. Among authors: messenger sl. Transplantation. 2013 Sep 15;96(5):463-8. doi: 10.1097/TP.0b013e31829b4142. Transplantation. 2013. PMID: 23823653 Free PMC article.
Chikungunya virus infections among travelers-United States, 2010-2013.
Lindsey NP, Prince HE, Kosoy O, Laven J, Messenger S, Staples JE, Fischer M. Lindsey NP, et al. Among authors: messenger s. Am J Trop Med Hyg. 2015 Jan;92(1):82-7. doi: 10.4269/ajtmh.14-0442. Epub 2014 Oct 27. Am J Trop Med Hyg. 2015. PMID: 25349374 Free PMC article.
96 results