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Single-cell transcriptomic profiling of the aging mouse brain.
Ximerakis M, Lipnick SL, Innes BT, Simmons SK, Adiconis X, Dionne D, Mayweather BA, Nguyen L, Niziolek Z, Ozek C, Butty VL, Isserlin R, Buchanan SM, Levine SS, Regev A, Bader GD, Levin JZ, Rubin LL. Ximerakis M, et al. Among authors: simmons sk. Nat Neurosci. 2019 Oct;22(10):1696-1708. doi: 10.1038/s41593-019-0491-3. Epub 2019 Sep 24. Nat Neurosci. 2019. PMID: 31551601
Comprehensive comparative analysis of 5'-end RNA-sequencing methods.
Adiconis X, Haber AL, Simmons SK, Levy Moonshine A, Ji Z, Busby MA, Shi X, Jacques J, Lancaster MA, Pan JQ, Regev A, Levin JZ. Adiconis X, et al. Among authors: simmons sk. Nat Methods. 2018 Jul;15(7):505-511. doi: 10.1038/s41592-018-0014-2. Epub 2018 Jun 4. Nat Methods. 2018. PMID: 29867192 Free PMC article.
Differential excitatory vs inhibitory SCN expression at single cell level regulates brain sodium channel function in neurodevelopmental disorders.
Du J, Simmons S, Brunklaus A, Adiconis X, Hession CC, Fu Z, Li Y, Shema R, Møller RS, Barak B, Feng G, Meisler M, Sanders S, Lerche H, Campbell AJ, McCarroll S, Levin JZ, Lal D. Du J, et al. Eur J Paediatr Neurol. 2020 Jan;24:129-133. doi: 10.1016/j.ejpn.2019.12.019. Epub 2019 Dec 28. Eur J Paediatr Neurol. 2020. PMID: 31928904
Systematic comparison of single-cell and single-nucleus RNA-sequencing methods.
Ding J, Adiconis X, Simmons SK, Kowalczyk MS, Hession CC, Marjanovic ND, Hughes TK, Wadsworth MH, Burks T, Nguyen LT, Kwon JYH, Barak B, Ge W, Kedaigle AJ, Carroll S, Li S, Hacohen N, Rozenblatt-Rosen O, Shalek AK, Villani AC, Regev A, Levin JZ. Ding J, et al. Among authors: simmons sk. Nat Biotechnol. 2020 Jun;38(6):737-746. doi: 10.1038/s41587-020-0465-8. Epub 2020 Apr 6. Nat Biotechnol. 2020. PMID: 32341560 Free PMC article.
Author Correction: Systematic comparison of single-cell and single-nucleus RNA-sequencing methods.
Ding J, Adiconis X, Simmons SK, Kowalczyk MS, Hession CC, Marjanovic ND, Hughes TK, Wadsworth MH, Burks T, Nguyen LT, Kwon JYH, Barak B, Ge W, Kedaigle AJ, Carroll S, Li S, Hacohen N, Rozenblatt-Rosen O, Shalek AK, Villani AC, Regev A, Levin JZ. Ding J, et al. Among authors: simmons sk. Nat Biotechnol. 2020 Jun;38(6):756. doi: 10.1038/s41587-020-0534-z. Nat Biotechnol. 2020. PMID: 32341567
Distinct subnetworks of the thalamic reticular nucleus.
Li Y, Lopez-Huerta VG, Adiconis X, Levandowski K, Choi S, Simmons SK, Arias-Garcia MA, Guo B, Yao AY, Blosser TR, Wimmer RD, Aida T, Atamian A, Naik T, Sun X, Bi D, Malhotra D, Hession CC, Shema R, Gomes M, Li T, Hwang E, Krol A, Kowalczyk M, Peça J, Pan G, Halassa MM, Levin JZ, Fu Z, Feng G. Li Y, et al. Among authors: simmons sk. Nature. 2020 Jul;583(7818):819-824. doi: 10.1038/s41586-020-2504-5. Epub 2020 Jul 22. Nature. 2020. PMID: 32699411 Free PMC article.
30 results