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LINCS Data Portal 2.0: next generation access point for perturbation-response signatures.
Nucleic Acids Res. 2020 Jan 8;48(D1):D431-D439. doi: 10.1093/nar/gkz1023.
Nucleic Acids Res. 2020.
PMID: 31701147
Free PMC article.
Connecting omics signatures and revealing biological mechanisms with iLINCS.
Pilarczyk M, Fazel-Najafabadi M, Kouril M, Shamsaei B, Vasiliauskas J, Niu W, Mahi N, Zhang L, Clark NA, Ren Y, White S, Karim R, Xu H, Biesiada J, Bennett MF, Davidson SE, Reichard JF, Roberts K, Stathias V, Koleti A, Vidovic D, Clarke DJB, Schürer SC, Ma'ayan A, Meller J, Medvedovic M.
Pilarczyk M, et al. Among authors: fazel najafabadi m.
Nat Commun. 2022 Aug 9;13(1):4678. doi: 10.1038/s41467-022-32205-3.
Nat Commun. 2022.
PMID: 35945222
Free PMC article.
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Lupus Susceptibility Region Containing CDKN1B rs34330 Mechanistically Influences Expression and Function of Multiple Target Genes, Also Linked to Proliferation and Apoptosis.
Singh B, Maiti GP, Zhou X, Fazel-Najafabadi M, Bae SC, Sun C, Terao C, Okada Y, Heng Chua K, Kochi Y, Guthridge JM, Zhang H, Weirauch M, James JA, Harley JB, Varshney GK, Looger LL, Nath SK.
Singh B, et al. Among authors: fazel najafabadi m.
Arthritis Rheumatol. 2021 Dec;73(12):2303-2313. doi: 10.1002/art.41799. Epub 2021 Oct 29.
Arthritis Rheumatol. 2021.
PMID: 33982894
Free PMC article.
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Discovery and Functional Characterization of Two Regulatory Variants Underlying Lupus Susceptibility at 2p13.1.
Fazel-Najafabadi M, Rallabandi HR, Singh MK, Maiti GP, Morris J, Looger LL, Nath SK.
Fazel-Najafabadi M, et al.
Genes (Basel). 2022 Jun 5;13(6):1016. doi: 10.3390/genes13061016.
Genes (Basel). 2022.
PMID: 35741778
Free PMC article.
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A Multilayered Post-Genome-Wide Association Study Analysis Pipeline Defines Functional Variants and Target Genes for Systemic Lupus Erythematosus.
Fazel-Najafabadi M, Looger LL, Rallabandi HR, Nath SK.
Fazel-Najafabadi M, et al.
Arthritis Rheumatol. 2024 Feb 19. doi: 10.1002/art.42829. Online ahead of print.
Arthritis Rheumatol. 2024.
PMID: 38369936
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A Non-Coding Variant in SLC15A4 Modulates Enhancer Activity and Lysosomal Deacidification Linked to Lupus Susceptibility.
Singh MK, Maiti GP, Reddy-Rallabandi H, Fazel-Najafabadi M, Looger LL, Nath SK.
Singh MK, et al. Among authors: fazel najafabadi m.
bioRxiv [Preprint]. 2023 Sep 2:2023.07.28.551056. doi: 10.1101/2023.07.28.551056.
bioRxiv. 2023.
PMID: 37546883
Free PMC article.
Updated.
Preprint.
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A multilayered post-GWAS analysis pipeline defines functional variants and target genes for systemic lupus erythematosus (SLE).
Fazel-Najafabadi M, Looger LL, Reddy-Rallabandi H, Nath SK.
Fazel-Najafabadi M, et al.
medRxiv [Preprint]. 2023 Sep 29:2023.04.07.23288295. doi: 10.1101/2023.04.07.23288295.
medRxiv. 2023.
PMID: 37066327
Free PMC article.
Updated.
Preprint.
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A Non-Coding Variant in SLC15A4 Modulates Enhancer Activity and Lysosomal Deacidification Linked to Lupus Susceptibility.
Singh MK, Maiti GP, Reddy-Rallabandi H, Fazel-Najafabadi M, Looger LL, Nath SK.
Singh MK, et al. Among authors: fazel najafabadi m.
Front Lupus. 2023;1:1244670. doi: 10.3389/flupu.2023.1244670. Epub 2023 Nov 22.
Front Lupus. 2023.
PMID: 38317862
Free PMC article.
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