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Macromolecular modeling and design in Rosetta: recent methods and frameworks.
Nat Methods. 2020 Jul;17(7):665-680. doi: 10.1038/s41592-020-0848-2. Epub 2020 Jun 1.
Nat Methods. 2020.
PMID: 32483333
Free PMC article.
Review.
Fully Flexible Docking of Medium Sized Ligand Libraries with RosettaLigand.
DeLuca S, Khar K, Meiler J.
DeLuca S, et al.
PLoS One. 2015 Jul 24;10(7):e0132508. doi: 10.1371/journal.pone.0132508. eCollection 2015.
PLoS One. 2015.
PMID: 26207742
Free PMC article.
Item in Clipboard
Fast docking on graphics processing units via Ray-Casting.
Khar KR, Goldschmidt L, Karanicolas J.
Khar KR, et al.
PLoS One. 2013 Aug 16;8(8):e70661. doi: 10.1371/journal.pone.0070661. eCollection 2013.
PLoS One. 2013.
PMID: 23976948
Free PMC article.
Item in Clipboard
Constructing Kinetically Controlled Denaturation Isotherms of Folded Proteins Using Denaturant-Pulse Chaperonin Binding.
O'Neil PT, Machen AJ, Thompson JA, Wang W, Hoang QQ, Baldwin MR, Khar KR, Karanicolas J, Fisher MT.
O'Neil PT, et al. Among authors: khar kr.
Methods Mol Biol. 2019;1873:293-304. doi: 10.1007/978-1-4939-8820-4_19.
Methods Mol Biol. 2019.
PMID: 30341618
Free PMC article.
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Chaperonin-Based Biolayer Interferometry To Assess the Kinetic Stability of Metastable, Aggregation-Prone Proteins.
Lea WA, O'Neil PT, Machen AJ, Naik S, Chaudhri T, McGinn-Straub W, Tischer A, Auton MT, Burns JR, Baldwin MR, Khar KR, Karanicolas J, Fisher MT.
Lea WA, et al. Among authors: khar kr.
Biochemistry. 2016 Sep 6;55(35):4885-908. doi: 10.1021/acs.biochem.6b00293. Epub 2016 Aug 19.
Biochemistry. 2016.
PMID: 27505032
Free PMC article.
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