Whalley CM - Search Results

1

Image-based consensus molecular subtype (imCMS) classification of colorectal cancer using deep learning.

Sirinukunwattana K, Domingo E, Richman SD, Redmond KL, Blake A, Verrill C, Leedham SJ, Chatzipli A, Hardy C, Whalley CM, Wu CH, Beggs AD, McDermott U, Dunne PD, Meade A, Walker SM, Murray GI, Samuel L, Seymour M, Tomlinson I, Quirke P, Maughan T, Rittscher J, Koelzer VH; S:CORT consortium. Sirinukunwattana K, et al. Among authors: whalley cm. Gut. 2021 Mar;70(3):544-554. doi: 10.1136/gutjnl-2019-319866. Epub 2020 Jul 20. Gut. 2021. PMID: 32690604 Free PMC article.

2

Whole Genome Methylation Analysis of Nondysplastic Barrett Esophagus that Progresses to Invasive Cancer.

Dilworth MP, Nieto T, Stockton JD, Whalley CM, Tee L, James JD, Noble F, Underwood TJ, Hallissey MT, Hejmadi R, Trudgill N, Tucker O, Beggs AD. Dilworth MP, et al. Among authors: whalley cm. Ann Surg. 2019 Mar;269(3):479-485. doi: 10.1097/SLA.0000000000002658. Ann Surg. 2019. PMID: 29384778 Free PMC article.

3

Targeted deep sequencing of urothelial bladder cancers and associated urinary DNA: a 23-gene panel with utility for non-invasive diagnosis and risk stratification.

Ward DG, Gordon NS, Boucher RH, Pirrie SJ, Baxter L, Ott S, Silcock L, Whalley CM, Stockton JD, Beggs AD, Griffiths M, Abbotts B, Ijakipour H, Latheef FN, Robinson RA, White AJ, James ND, Zeegers MP, Cheng KK, Bryan RT. Ward DG, et al. Among authors: whalley cm. BJU Int. 2019 Sep;124(3):532-544. doi: 10.1111/bju.14808. Epub 2019 Jun 19. BJU Int. 2019. PMID: 31077629 Free PMC article.

4

Rapid implementation and validation of a cold-chain free SARS-CoV-2 diagnostic testing workflow to support surge capacity.

Bosworth A, Whalley C, Poxon C, Wanigasooriya K, Pickles O, Aldera EL, Papakonstantinou D, Morley GL, Walker EM, Zielinska AE, McLoughlin D, Webster C, Plant T, Ellis A, Richter A, Kidd IM, Beggs AD. Bosworth A, et al. J Clin Virol. 2020 Jul;128:104469. doi: 10.1016/j.jcv.2020.104469. Epub 2020 May 23. J Clin Virol. 2020. PMID: 32474371 Free PMC article.

5

The transition from primary colorectal cancer to isolated peritoneal malignancy is associated with an increased tumour mutational burden.

Hallam S, Stockton J, Bryer C, Whalley C, Pestinger V, Youssef H, Beggs AD. Hallam S, et al. Sci Rep. 2020 Nov 3;10(1):18900. doi: 10.1038/s41598-020-75844-6. Sci Rep. 2020. PMID: 33144643 Free PMC article.

6

Detection of SARS-CoV-2 on laboratory paper request forms: a potential source of infection for laboratory personnel.

Winzor G, Bosworth A, Whalley C, Beggs AD, Atabani SF. Winzor G, et al. J Hosp Infect. 2021 Feb;108:207-208. doi: 10.1016/j.jhin.2020.11.003. Epub 2020 Nov 12. J Hosp Infect. 2021. PMID: 33188868 Free PMC article. No abstract available.

7

Ultra-Low DNA Input into Whole Genome Methylation Assays and Detection of Oncogenic Methylation and Copy Number Variants in Circulating Tumour DNA.

Whalley C, Payne K, Domingo E, Blake A, Richman S, Brooks J, Batis N, Spruce R; S-CORT Consortium; Mehanna H, Nankivell P, Beggs AD. Whalley C, et al. Epigenomes. 2021 Feb 19;5(1):6. doi: 10.3390/epigenomes5010006. eCollection 2021 Feb 19. Epigenomes. 2021. PMID: 33777442 Free PMC article.

8

Complete response to neoadjuvant chemoradiotherapy in rectal cancer is associated with RAS/AKT mutations and high tumour mutational burden.

Stockton JD, Tee L, Whalley C, James J, Dilworth M, Wheat R, Nieto T; S-CORT Consortium; Geh I, Barros-Silva JD, Beggs AD. Stockton JD, et al. Radiat Oncol. 2021 Jul 13;16(1):129. doi: 10.1186/s13014-021-01853-y. Radiat Oncol. 2021. PMID: 34256782 Free PMC article.

9

Multi-modality detection of SARS-CoV-2 in faecal donor samples for transplantation and in asymptomatic emergency surgical admissions.

Manzoor SE, Zaman S, Whalley C, Inglis D, Bosworth A, Kidd M, Shabir S, Quraishi N, Green CA, Iqbal T, Beggs AD. Manzoor SE, et al. F1000Res. 2021 May 11;10:373. doi: 10.12688/f1000research.52178.1. eCollection 2021. F1000Res. 2021. PMID: 34367617 Free PMC article.

10

[No title available]

[No authors listed] [No authors listed] PMID: 34968257

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