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An Early Pandemic Analysis of SARS-CoV-2 Population Structure and Dynamics in Arizona.
Ladner JT, Larsen BB, Bowers JR, Hepp CM, Bolyen E, Folkerts M, Sheridan K, Pfeiffer A, Yaglom H, Lemmer D, Sahl JW, Kaelin EA, Maqsood R, Bokulich NA, Quirk G, Watts TD, Komatsu KK, Waddell V, Lim ES, Caporaso JG, Engelthaler DM, Worobey M, Keim P. Ladner JT, et al. Among authors: caporaso jg. mBio. 2020 Sep 4;11(5):e02107-20. doi: 10.1128/mBio.02107-20. mBio. 2020. PMID: 32887735 Free PMC article.
mockrobiota: a Public Resource for Microbiome Bioinformatics Benchmarking.
Bokulich NA, Rideout JR, Mercurio WG, Shiffer A, Wolfe B, Maurice CF, Dutton RJ, Turnbaugh PJ, Knight R, Caporaso JG. Bokulich NA, et al. Among authors: caporaso jg. mSystems. 2016 Oct 18;1(5):e00062-16. doi: 10.1128/mSystems.00062-16. eCollection 2016 Sep-Oct. mSystems. 2016. PMID: 27822553 Free PMC article.
q2-longitudinal: Longitudinal and Paired-Sample Analyses of Microbiome Data.
Bokulich NA, Dillon MR, Zhang Y, Rideout JR, Bolyen E, Li H, Albert PS, Caporaso JG. Bokulich NA, et al. Among authors: caporaso jg. mSystems. 2018 Nov 20;3(6):e00219-18. doi: 10.1128/mSystems.00219-18. eCollection 2018 Nov-Dec. mSystems. 2018. PMID: 30505944 Free PMC article.
Effects of ursodeoxycholic acid on the gut microbiome and colorectal adenoma development.
Pearson T, Caporaso JG, Yellowhair M, Bokulich NA, Padi M, Roe DJ, Wertheim BC, Linhart M, Martinez JA, Bilagody C, Hornstra H, Alberts DS, Lance P, Thompson PA. Pearson T, et al. Among authors: caporaso jg. Cancer Med. 2019 Feb;8(2):617-628. doi: 10.1002/cam4.1965. Epub 2019 Jan 16. Cancer Med. 2019. PMID: 30652422 Free PMC article. Clinical Trial.
An Introduction to Applied Bioinformatics: a free, open, and interactive text.
Bolyen E, Rideout JR, Chase J, Pitman TA, Shiffer A, Mercurio W, Dillon MR, Caporaso JG. Bolyen E, et al. Among authors: caporaso jg. J Open Source Educ. 2018;1(5):27. doi: 10.21105/jose.00027. Epub 2018 Oct 2. J Open Source Educ. 2018. PMID: 30687845 Free PMC article. No abstract available.
Domestic canines do not display evidence of gut microbial dysbiosis in the presence of Clostridioides (Clostridium) difficile, despite cellular susceptibility to its toxins.
Stone NE, Nunnally AE, Jimenez V Jr, Cope EK, Sahl JW, Sheridan K, Hornstra HM, Vinocur J, Settles EW, Headley KC, Williamson CHD, Rideout JR, Bolyen E, Caporaso JG, Terriquez J, Monroy FP, Busch JD, Keim P, Wagner DM. Stone NE, et al. Among authors: caporaso jg. Anaerobe. 2019 Aug;58:53-72. doi: 10.1016/j.anaerobe.2019.03.017. Epub 2019 Apr 1. Anaerobe. 2019. PMID: 30946985 Free article.
121 results