Stern A - Search Results

1

Competition between social cheater viruses is driven by mechanistically different cheating strategies.

Meir M, Harel N, Miller D, Gelbart M, Eldar A, Gophna U, Stern A. Meir M, et al. Among authors: stern a. Sci Adv. 2020 Aug 21;6(34):eabb7990. doi: 10.1126/sciadv.abb7990. Print 2020 Aug. Sci Adv. 2020. PMID: 32937370 Free PMC article.

2

A likelihood framework to analyse phyletic patterns.

Cohen O, Rubinstein ND, Stern A, Gophna U, Pupko T. Cohen O, et al. Among authors: stern a. Philos Trans R Soc Lond B Biol Sci. 2008 Dec 27;363(1512):3903-11. doi: 10.1098/rstb.2008.0177. Philos Trans R Soc Lond B Biol Sci. 2008. PMID: 18852099 Free PMC article.

3

An evolutionary analysis of lateral gene transfer in thymidylate synthase enzymes.

Stern A, Mayrose I, Penn O, Shaul S, Gophna U, Pupko T. Stern A, et al. Syst Biol. 2010 Mar;59(2):212-25. doi: 10.1093/sysbio/syp104. Epub 2010 Jan 15. Syst Biol. 2010. PMID: 20525631 Free PMC article.

4

Within-patient mutation frequencies reveal fitness costs of CpG dinucleotides and drastic amino acid changes in HIV.

Theys K, Feder AF, Gelbart M, Hartl M, Stern A, Pennings PS. Theys K, et al. Among authors: stern a. PLoS Genet. 2018 Jun 28;14(6):e1007420. doi: 10.1371/journal.pgen.1007420. eCollection 2018 Jun. PLoS Genet. 2018. PMID: 29953449 Free PMC article.

5

Inferring population genetics parameters of evolving viruses using time-series data.

Zinger T, Gelbart M, Miller D, Pennings PS, Stern A. Zinger T, et al. Among authors: stern a. Virus Evol. 2019 Jun 8;5(1):vez011. doi: 10.1093/ve/vez011. eCollection 2019 Jan. Virus Evol. 2019. PMID: 31191979 Free PMC article.

6

A Bayesian Framework for Inferring the Influence of Sequence Context on Point Mutations.

Ling G, Miller D, Nielsen R, Stern A. Ling G, et al. Among authors: stern a. Mol Biol Evol. 2020 Mar 1;37(3):893-903. doi: 10.1093/molbev/msz248. Mol Biol Evol. 2020. PMID: 31651955 Free PMC article.

7

Direct sequencing of RNA with MinION Nanopore: detecting mutations based on associations.

Harel N, Meir M, Gophna U, Stern A. Harel N, et al. Among authors: stern a. Nucleic Acids Res. 2019 Dec 16;47(22):e148. doi: 10.1093/nar/gkz907. Nucleic Acids Res. 2019. PMID: 31665473 Free PMC article.

8

Full genome viral sequences inform patterns of SARS-CoV-2 spread into and within Israel.

Miller D, Martin MA, Harel N, Tirosh O, Kustin T, Meir M, Sorek N, Gefen-Halevi S, Amit S, Vorontsov O, Shaag A, Wolf D, Peretz A, Shemer-Avni Y, Roif-Kaminsky D, Kopelman NM, Huppert A, Koelle K, Stern A. Miller D, et al. Among authors: stern a. Nat Commun. 2020 Nov 2;11(1):5518. doi: 10.1038/s41467-020-19248-0. Nat Commun. 2020. PMID: 33139704 Free PMC article.

9

Drivers of within-host genetic diversity in acute infections of viruses.

Gelbart M, Harari S, Ben-Ari Y, Kustin T, Wolf D, Mandelboim M, Mor O, Pennings PS, Stern A. Gelbart M, et al. Among authors: stern a. PLoS Pathog. 2020 Nov 4;16(11):e1009029. doi: 10.1371/journal.ppat.1009029. eCollection 2020 Nov. PLoS Pathog. 2020. PMID: 33147296 Free PMC article.

10

Site-Specific Evolutionary Rate Shifts in HIV-1 and SIV.

Gelbart M, Stern A. Gelbart M, et al. Among authors: stern a. Viruses. 2020 Nov 16;12(11):1312. doi: 10.3390/v12111312. Viruses. 2020. PMID: 33207801 Free PMC article.

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