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The 3D genomic landscape of differential response to EGFR/HER2 inhibition in endocrine-resistant breast cancer cells.
Biochim Biophys Acta Gene Regul Mech. 2020 Nov;1863(11):194631. doi: 10.1016/j.bbagrm.2020.194631. Epub 2020 Sep 19.
Biochim Biophys Acta Gene Regul Mech. 2020.
PMID: 32956836
Free PMC article.
Hi-C profiling of cancer spheroids identifies 3D-growth-specific chromatin interactions in breast cancer endocrine resistance.
Li J, Fang K, Choppavarapu L, Yang K, Yang Y, Wang J, Cao R, Jatoi I, Jin VX.
Li J, et al. Among authors: choppavarapu l.
Clin Epigenetics. 2021 Sep 17;13(1):175. doi: 10.1186/s13148-021-01167-6.
Clin Epigenetics. 2021.
PMID: 34535185
Free PMC article.
Item in Clipboard
Circulating MicroRNAs as Potential Biomarkers in Glioma: A Mini-Review.
Choppavarapu L, Kandi SM.
Choppavarapu L, et al.
Endocr Metab Immune Disord Drug Targets. 2021;21(2):195-202. doi: 10.2174/1871530320666200730230422.
Endocr Metab Immune Disord Drug Targets. 2021.
PMID: 32744979
Review.
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Overexpression and lack of copy number variation in the BMI-1 gene in human glioma.
Madathan Kandy S, Ishwara Bhat D, Choppavarapu L, Suvatha A, Ghati Kasturirangan C.
Madathan Kandy S, et al. Among authors: choppavarapu l.
Oncol Lett. 2015 Nov;10(5):3318-3322. doi: 10.3892/ol.2015.3686. Epub 2015 Sep 8.
Oncol Lett. 2015.
PMID: 26722333
Free PMC article.
Item in Clipboard
Hi-C profiling in tissues reveals 3D chromatin-regulated breast tumor heterogeneity and tumor-specific looping-mediated biological pathways.
Choppavarapu L, Fang K, Liu T, Jin VX.
Choppavarapu L, et al.
bioRxiv [Preprint]. 2024 Mar 13:2024.03.13.584872. doi: 10.1101/2024.03.13.584872.
bioRxiv. 2024.
PMID: 38559097
Free PMC article.
Preprint.
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Reprogramming of 3D chromatin domains by antagonizing the β-catenin/CBP interaction attenuates insulin signaling in pancreatic cancer.
Zhou Y, Li T, He Z, Choppavarapu L, Hu X, Cao R, Leone GW, Kahn M, Jin VX.
Zhou Y, et al. Among authors: choppavarapu l.
bioRxiv [Preprint]. 2023 Nov 14:2023.11.10.566585. doi: 10.1101/2023.11.10.566585.
bioRxiv. 2023.
PMID: 38013997
Free PMC article.
Preprint.
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Integration of scHi-C and scRNA-seq data defines distinct 3D-regulated and biological-context dependent cell subpopulations.
Zhou Y, Li T, Choppavarapu L, Jin VX.
Zhou Y, et al. Among authors: choppavarapu l.
bioRxiv [Preprint]. 2023 Oct 2:2023.09.29.560193. doi: 10.1101/2023.09.29.560193.
bioRxiv. 2023.
PMID: 37873257
Free PMC article.
Preprint.
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