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Optimized use of Oxford Nanopore flowcells for hybrid assemblies.
Lipworth S, Pickford H, Sanderson N, Chau KK, Kavanagh J, Barker L, Vaughan A, Swann J, Andersson M, Jeffery K, Morgan M, Peto TEA, Crook DW, Stoesser N, Walker AS. Lipworth S, et al. Among authors: andersson m. Microb Genom. 2020 Nov;6(11):mgen000453. doi: 10.1099/mgen.0.000453. Microb Genom. 2020. PMID: 33174830 Free PMC article.
Oxford Screening CSF and Respiratory samples ('OSCAR'): results of a pilot study to screen clinical samples from a diagnostic microbiology laboratory for viruses using Illumina next generation sequencing.
Sharp C, Golubchik T, Gregory WF, McNaughton AL, Gow N, Selvaratnam M, Mirea A, Foster D, Andersson M, Klenerman P, Jeffery K, Matthews PC. Sharp C, et al. Among authors: andersson m. BMC Res Notes. 2018 Feb 9;11(1):120. doi: 10.1186/s13104-018-3234-8. BMC Res Notes. 2018. PMID: 29426368 Free PMC article.
Gonorrhoea treatment failure caused by a Neisseria gonorrhoeae strain with combined ceftriaxone and high-level azithromycin resistance, England, February 2018.
Eyre DW, Sanderson ND, Lord E, Regisford-Reimmer N, Chau K, Barker L, Morgan M, Newnham R, Golparian D, Unemo M, Crook DW, Peto TE, Hughes G, Cole MJ, Fifer H, Edwards A, Andersson MI. Eyre DW, et al. Among authors: andersson mi. Euro Surveill. 2018 Jul;23(27):1800323. doi: 10.2807/1560-7917.ES.2018.23.27.1800323. Euro Surveill. 2018. PMID: 29991383 Free PMC article.
Trends over time in Escherichia coli bloodstream infections, urinary tract infections, and antibiotic susceptibilities in Oxfordshire, UK, 1998-2016: a study of electronic health records.
Vihta KD, Stoesser N, Llewelyn MJ, Quan TP, Davies T, Fawcett NJ, Dunn L, Jeffery K, Butler CC, Hayward G, Andersson M, Morgan M, Oakley S, Mason A, Hopkins S, Wyllie DH, Crook DW, Wilcox MH, Johnson AP, Peto TEA, Walker AS. Vihta KD, et al. Among authors: andersson m. Lancet Infect Dis. 2018 Oct;18(10):1138-1149. doi: 10.1016/S1473-3099(18)30353-0. Epub 2018 Aug 17. Lancet Infect Dis. 2018. PMID: 30126643 Free PMC article.
Hepatitis virus (HCV) diagnosis and access to treatment in a UK cohort.
Adland E, Jesuthasan G, Downs L, Wharton V, Wilde G, McNaughton AL, Collier J, Barnes E, Klenerman P, Andersson M, Jeffery K, Matthews PC. Adland E, et al. Among authors: andersson m. BMC Infect Dis. 2018 Sep 14;18(1):461. doi: 10.1186/s12879-018-3367-3. BMC Infect Dis. 2018. PMID: 30217169 Free PMC article.
Metagenomic Nanopore Sequencing of Influenza Virus Direct from Clinical Respiratory Samples.
Lewandowski K, Xu Y, Pullan ST, Lumley SF, Foster D, Sanderson N, Vaughan A, Morgan M, Bright N, Kavanagh J, Vipond R, Carroll M, Marriott AC, Gooch KE, Andersson M, Jeffery K, Peto TEA, Crook DW, Walker AS, Matthews PC. Lewandowski K, et al. Among authors: andersson m. J Clin Microbiol. 2019 Dec 23;58(1):e00963-19. doi: 10.1128/JCM.00963-19. Print 2019 Dec 23. J Clin Microbiol. 2019. PMID: 31666364 Free PMC article.
Optimizing DNA Extraction Methods for Nanopore Sequencing of Neisseria gonorrhoeae Directly from Urine Samples.
Street TL, Barker L, Sanderson ND, Kavanagh J, Hoosdally S, Cole K, Newnham R, Selvaratnam M, Andersson M, Llewelyn MJ, O'Grady J, Crook DW, Eyre DW. Street TL, et al. Among authors: andersson m. J Clin Microbiol. 2020 Feb 24;58(3):e01822-19. doi: 10.1128/JCM.01822-19. Print 2020 Feb 24. J Clin Microbiol. 2020. PMID: 31852766 Free PMC article.
Reconciling the Potentially Irreconcilable? Genotypic and Phenotypic Amoxicillin-Clavulanate Resistance in Escherichia coli.
Davies TJ, Stoesser N, Sheppard AE, Abuoun M, Fowler P, Swann J, Quan TP, Griffiths D, Vaughan A, Morgan M, Phan HTT, Jeffery KJ, Andersson M, Ellington MJ, Ekelund O, Woodford N, Mathers AJ, Bonomo RA, Crook DW, Peto TEA, Anjum MF, Walker AS. Davies TJ, et al. Among authors: andersson m. Antimicrob Agents Chemother. 2020 May 21;64(6):e02026-19. doi: 10.1128/AAC.02026-19. Print 2020 May 21. Antimicrob Agents Chemother. 2020. PMID: 32205351 Free PMC article.
2,825 results