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Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir.
Fellows Yates JA, Andrades Valtueña A, Vågene ÅJ, Cribdon B, Velsko IM, Borry M, Bravo-Lopez MJ, Fernandez-Guerra A, Green EJ, Ramachandran SL, Heintzman PD, Spyrou MA, Hübner A, Gancz AS, Hider J, Allshouse AF, Zaro V, Warinner C. Fellows Yates JA, et al. Among authors: heintzman pd. Sci Data. 2021 Jan 26;8(1):31. doi: 10.1038/s41597-021-00816-y. Sci Data. 2021. PMID: 33500403 Free PMC article.
Strengthening global-change science by integrating aeDNA with paleoecoinformatics.
Williams JW, Spanbauer TL, Heintzman PD, Blois J, Capo E, Goring SJ, Monchamp ME, Parducci L, Von Eggers JM; Contributing authors. Williams JW, et al. Among authors: heintzman pd. Trends Ecol Evol. 2023 Oct;38(10):946-960. doi: 10.1016/j.tree.2023.04.016. Epub 2023 May 23. Trends Ecol Evol. 2023. PMID: 37230884 Review.
Environmental genomics of Late Pleistocene black bears and giant short-faced bears.
Pedersen MW, De Sanctis B, Saremi NF, Sikora M, Puckett EE, Gu Z, Moon KL, Kapp JD, Vinner L, Vardanyan Z, Ardelean CF, Arroyo-Cabrales J, Cahill JA, Heintzman PD, Zazula G, MacPhee RDE, Shapiro B, Durbin R, Willerslev E. Pedersen MW, et al. Among authors: heintzman pd. Curr Biol. 2021 Jun 21;31(12):2728-2736.e8. doi: 10.1016/j.cub.2021.04.027. Epub 2021 Apr 19. Curr Biol. 2021. PMID: 33878301 Free article.
Integrating multi-taxon palaeogenomes and sedimentary ancient DNA to study past ecosystem dynamics.
Dussex N, Bergfeldt N, de Anca Prado V, Dehasque M, Díez-Del-Molino D, Ersmark E, Kanellidou F, Larsson P, Lemež Š, Lord E, Mármol-Sánchez E, Meleg IN, Måsviken J, Naidoo T, Studerus J, Vicente M, von Seth J, Götherström A, Dalén L, Heintzman PD. Dussex N, et al. Among authors: heintzman pd. Proc Biol Sci. 2021 Aug 25;288(1957):20211252. doi: 10.1098/rspb.2021.1252. Epub 2021 Aug 25. Proc Biol Sci. 2021. PMID: 34428961 Free PMC article. Review.
The era of reference genomes in conservation genomics.
Formenti G, Theissinger K, Fernandes C, Bista I, Bombarely A, Bleidorn C, Ciofi C, Crottini A, Godoy JA, Höglund J, Malukiewicz J, Mouton A, Oomen RA, Paez S, Palsbøll PJ, Pampoulie C, Ruiz-López MJ, Svardal H, Theofanopoulou C, de Vries J, Waldvogel AM, Zhang G, Mazzoni CJ, Jarvis ED, Bálint M; European Reference Genome Atlas (ERGA) Consortium. Formenti G, et al. Trends Ecol Evol. 2022 Mar;37(3):197-202. doi: 10.1016/j.tree.2021.11.008. Epub 2022 Jan 24. Trends Ecol Evol. 2022. PMID: 35086739 Free article.
The genome of a Late Pleistocene human from a Clovis burial site in western Montana.
Rasmussen M, Anzick SL, Waters MR, Skoglund P, DeGiorgio M, Stafford TW Jr, Rasmussen S, Moltke I, Albrechtsen A, Doyle SM, Poznik GD, Gudmundsdottir V, Yadav R, Malaspinas AS, White SS 5th, Allentoft ME, Cornejo OE, Tambets K, Eriksson A, Heintzman PD, Karmin M, Korneliussen TS, Meltzer DJ, Pierre TL, Stenderup J, Saag L, Warmuth VM, Lopes MC, Malhi RS, Brunak S, Sicheritz-Ponten T, Barnes I, Collins M, Orlando L, Balloux F, Manica A, Gupta R, Metspalu M, Bustamante CD, Jakobsson M, Nielsen R, Willerslev E. Rasmussen M, et al. Among authors: heintzman pd. Nature. 2014 Feb 13;506(7487):225-9. doi: 10.1038/nature13025. Nature. 2014. PMID: 24522598 Free PMC article.
Bison phylogeography constrains dispersal and viability of the Ice Free Corridor in western Canada.
Heintzman PD, Froese D, Ives JW, Soares AE, Zazula GD, Letts B, Andrews TD, Driver JC, Hall E, Hare PG, Jass CN, MacKay G, Southon JR, Stiller M, Woywitka R, Suchard MA, Shapiro B. Heintzman PD, et al. Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):8057-63. doi: 10.1073/pnas.1601077113. Epub 2016 Jun 6. Proc Natl Acad Sci U S A. 2016. PMID: 27274051 Free PMC article.
Timing and causes of mid-Holocene mammoth extinction on St. Paul Island, Alaska.
Graham RW, Belmecheri S, Choy K, Culleton BJ, Davies LJ, Froese D, Heintzman PD, Hritz C, Kapp JD, Newsom LA, Rawcliffe R, Saulnier-Talbot É, Shapiro B, Wang Y, Williams JW, Wooller MJ. Graham RW, et al. Among authors: heintzman pd. Proc Natl Acad Sci U S A. 2016 Aug 16;113(33):9310-4. doi: 10.1073/pnas.1604903113. Epub 2016 Aug 1. Proc Natl Acad Sci U S A. 2016. PMID: 27482085 Free PMC article.
32 results