Chakraborty AK - Search Results

1

Design of immunogens to elicit broadly neutralizing antibodies against HIV targeting the CD4 binding site.

Conti S, Kaczorowski KJ, Song G, Porter K, Andrabi R, Burton DR, Chakraborty AK, Karplus M. Conti S, et al. Among authors: chakraborty ak. Proc Natl Acad Sci U S A. 2021 Mar 2;118(9):e2018338118. doi: 10.1073/pnas.2018338118. Proc Natl Acad Sci U S A. 2021. PMID: 33637649 Free PMC article.

2

Molecular flexibility can influence the stimulatory ability of receptor-ligand interactions at cell-cell junctions.

Qi S, Krogsgaard M, Davis MM, Chakraborty AK. Qi S, et al. Among authors: chakraborty ak. Proc Natl Acad Sci U S A. 2006 Mar 21;103(12):4416-21. doi: 10.1073/pnas.0510991103. Epub 2006 Mar 13. Proc Natl Acad Sci U S A. 2006. PMID: 16537380 Free PMC article.

3

Purely stochastic binary decisions in cell signaling models without underlying deterministic bistabilities.

Artyomov MN, Das J, Kardar M, Chakraborty AK. Artyomov MN, et al. Among authors: chakraborty ak. Proc Natl Acad Sci U S A. 2007 Nov 27;104(48):18958-63. doi: 10.1073/pnas.0706110104. Epub 2007 Nov 19. Proc Natl Acad Sci U S A. 2007. PMID: 18025473 Free PMC article.

4

Origin of the sharp boundary that discriminates positive and negative selection of thymocytes.

Prasad A, Zikherman J, Das J, Roose JP, Weiss A, Chakraborty AK. Prasad A, et al. Among authors: chakraborty ak. Proc Natl Acad Sci U S A. 2009 Jan 13;106(2):528-33. doi: 10.1073/pnas.0805981105. Epub 2008 Dec 19. Proc Natl Acad Sci U S A. 2009. PMID: 19098101 Free PMC article.

5

Fast on-rates allow short dwell time ligands to activate T cells.

Govern CC, Paczosa MK, Chakraborty AK, Huseby ES. Govern CC, et al. Among authors: chakraborty ak. Proc Natl Acad Sci U S A. 2010 May 11;107(19):8724-9. doi: 10.1073/pnas.1000966107. Epub 2010 Apr 26. Proc Natl Acad Sci U S A. 2010. PMID: 20421471 Free PMC article.

6

CD4 and CD8 binding to MHC molecules primarily acts to enhance Lck delivery.

Artyomov MN, Lis M, Devadas S, Davis MM, Chakraborty AK. Artyomov MN, et al. Among authors: chakraborty ak. Proc Natl Acad Sci U S A. 2010 Sep 28;107(39):16916-21. doi: 10.1073/pnas.1010568107. Epub 2010 Sep 13. Proc Natl Acad Sci U S A. 2010. PMID: 20837541 Free PMC article.

7

Evolving concepts of specificity in immune reactions.

Eisen HN, Chakraborty AK. Eisen HN, et al. Among authors: chakraborty ak. Proc Natl Acad Sci U S A. 2010 Dec 28;107(52):22373-80. doi: 10.1073/pnas.1012051108. Epub 2010 Dec 20. Proc Natl Acad Sci U S A. 2010. PMID: 21173256 Free PMC article.

8

Coordinate linkage of HIV evolution reveals regions of immunological vulnerability.

Dahirel V, Shekhar K, Pereyra F, Miura T, Artyomov M, Talsania S, Allen TM, Altfeld M, Carrington M, Irvine DJ, Walker BD, Chakraborty AK. Dahirel V, et al. Among authors: chakraborty ak. Proc Natl Acad Sci U S A. 2011 Jul 12;108(28):11530-5. doi: 10.1073/pnas.1105315108. Epub 2011 Jun 20. Proc Natl Acad Sci U S A. 2011. PMID: 21690407 Free PMC article.

9

Stochastic effects are important in intrahost HIV evolution even when viral loads are high.

Read EL, Tovo-Dwyer AA, Chakraborty AK. Read EL, et al. Among authors: chakraborty ak. Proc Natl Acad Sci U S A. 2012 Nov 27;109(48):19727-32. doi: 10.1073/pnas.1206940109. Epub 2012 Oct 29. Proc Natl Acad Sci U S A. 2012. PMID: 23112156 Free PMC article.

10

Immunopaleontology reveals how affinity enhancement is achieved during affinity maturation of antibodies to influenza virus.

Eisen HN, Chakraborty AK. Eisen HN, et al. Among authors: chakraborty ak. Proc Natl Acad Sci U S A. 2013 Jan 2;110(1):7-8. doi: 10.1073/pnas.1219396110. Proc Natl Acad Sci U S A. 2013. PMID: 23284164 Free PMC article. No abstract available.

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