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DoubletDecon: Deconvoluting Doublets from Single-Cell RNA-Sequencing Data.
DePasquale EAK, Schnell DJ, Van Camp PJ, Valiente-Alandí Í, Blaxall BC, Grimes HL, Singh H, Salomonis N. DePasquale EAK, et al. Among authors: salomonis n. Cell Rep. 2019 Nov 5;29(6):1718-1727.e8. doi: 10.1016/j.celrep.2019.09.082. Cell Rep. 2019. PMID: 31693907 Free PMC article.
An immunophenotype-coupled transcriptomic atlas of human hematopoietic progenitors.
Zhang X, Song B, Carlino MJ, Li G, Ferchen K, Chen M, Thompson EN, Kain BN, Schnell D, Thakkar K, Kouril M, Jin K, Hay SB, Sen S, Bernardicius D, Ma S, Bennett SN, Croteau J, Salvatori O, Lye MH, Gillen AE, Jordan CT, Singh H, Krause DS, Salomonis N, Grimes HL. Zhang X, et al. Among authors: salomonis n. Nat Immunol. 2024 Apr;25(4):703-715. doi: 10.1038/s41590-024-01782-4. Epub 2024 Mar 21. Nat Immunol. 2024. PMID: 38514887 Free PMC article.
Temporal dynamics and genomic programming of plasma cell fates.
Manakkat Vijay GK, Zhou M, Thakkar K, Rothrauff A, Chawla AS, Chen D, Lau LC, Gerges PH, Chetal K, Chhibbar P, Fan J, Das J, Joglekar A, Borghesi L, Salomonis N, Xu H, Singh H. Manakkat Vijay GK, et al. Among authors: salomonis n. Nat Immunol. 2024 May 2. doi: 10.1038/s41590-024-01831-y. Online ahead of print. Nat Immunol. 2024. PMID: 38698087
Protocol for Identification and Removal of Doublets with DoubletDecon.
DePasquale EAK, Schnell D, Chetal K, Salomonis N. DePasquale EAK, et al. Among authors: salomonis n. STAR Protoc. 2020 Aug 11;1(2):100085. doi: 10.1016/j.xpro.2020.100085. eCollection 2020 Sep 18. STAR Protoc. 2020. PMID: 33111118 Free PMC article.
139 results