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Molecular evidence of SARS-CoV-2 in New York before the first pandemic wave.
Hernandez MM, Gonzalez-Reiche AS, Alshammary H, Fabre S, Khan Z, van De Guchte A, Obla A, Ellis E, Sullivan MJ, Tan J, Alburquerque B, Soto J, Wang CY, Sridhar SH, Wang YC, Smith M, Sebra R, Paniz-Mondolfi AE, Gitman MR, Nowak MD, Cordon-Cardo C, Luksza M, Krammer F, van Bakel H, Simon V, Sordillo EM. Hernandez MM, et al. Nat Commun. 2021 Jun 8;12(1):3463. doi: 10.1038/s41467-021-23688-7. Nat Commun. 2021. PMID: 34103497 Free PMC article.
Introductions and early spread of SARS-CoV-2 in the New York City area.
Gonzalez-Reiche AS, Hernandez MM, Sullivan MJ, Ciferri B, Alshammary H, Obla A, Fabre S, Kleiner G, Polanco J, Khan Z, Alburquerque B, van de Guchte A, Dutta J, Francoeur N, Melo BS, Oussenko I, Deikus G, Soto J, Sridhar SH, Wang YC, Twyman K, Kasarskis A, Altman DR, Smith M, Sebra R, Aberg J, Krammer F, García-Sastre A, Luksza M, Patel G, Paniz-Mondolfi A, Gitman M, Sordillo EM, Simon V, van Bakel H. Gonzalez-Reiche AS, et al. Science. 2020 Jul 17;369(6501):297-301. doi: 10.1126/science.abc1917. Epub 2020 May 29. Science. 2020. PMID: 32471856 Free PMC article.
The arrival and spread of SARS-CoV-2 in Colombia.
Ramírez JD, Florez C, Muñoz M, Hernández C, Castillo A, Gomez S, Rico A, Pardo L, Barros EC, Castañeda S, Ballesteros N, Martínez D, Vega L, Jaimes JE, Cruz-Saavedra L, Herrera G, Patiño LH, Teherán AA, Gonzalez-Reiche AS, Hernandez MM, Sordillo EM, Simon V, van Bakel H, Paniz-Mondolfi A. Ramírez JD, et al. J Med Virol. 2021 Feb;93(2):1158-1163. doi: 10.1002/jmv.26393. Epub 2020 Aug 13. J Med Virol. 2021. PMID: 32761908 Free PMC article.
Limited intestinal inflammation despite diarrhea, fecal viral RNA and SARS-CoV-2-specific IgA in patients with acute COVID-19.
Britton GJ, Chen-Liaw A, Cossarini F, Livanos AE, Spindler MP, Plitt T, Eggers J, Mogno I, Gonzalez-Reiche AS, Siu S, Tankelevich M, Grinspan LT, Dixon RE, Jha D, van de Guchte A, Khan Z, Martinez-Delgado G, Amanat F, Hoagland DA, tenOever BR, Dubinsky MC, Merad M, van Bakel H, Krammer F, Bongers G, Mehandru S, Faith JJ. Britton GJ, et al. medRxiv [Preprint]. 2020 Dec 9:2020.09.03.20183947. doi: 10.1101/2020.09.03.20183947. medRxiv. 2020. PMID: 32909002 Free PMC article. Updated. Preprint.
SARS-CoV-2 spread across the Colombian-Venezuelan border.
Paniz-Mondolfi A, Muñoz M, Florez C, Gomez S, Rico A, Pardo L, Barros EC, Hernández C, Delgado L, Jaimes JE, Pérez L, Teherán AA, Alshammary HA, Obla A, Khan Z, Dutta J, van de Guchte A, Gonzalez-Reiche AS, Hernandez MM, Sordillo EM, Simon V, van Bakel H, Llewellyn MS, Ramírez JD. Paniz-Mondolfi A, et al. Infect Genet Evol. 2020 Dec;86:104616. doi: 10.1016/j.meegid.2020.104616. Epub 2020 Nov 4. Infect Genet Evol. 2020. PMID: 33157300 Free PMC article.
SARS-CoV-2 Transmission among Marine Recruits during Quarantine.
Letizia AG, Ramos I, Obla A, Goforth C, Weir DL, Ge Y, Bamman MM, Dutta J, Ellis E, Estrella L, George MC, Gonzalez-Reiche AS, Graham WD, van de Guchte A, Gutierrez R, Jones F, Kalomoiri A, Lizewski R, Lizewski S, Marayag J, Marjanovic N, Millar EV, Nair VD, Nudelman G, Nunez E, Pike BL, Porter C, Regeimbal J, Rirak S, Santa Ana E, Sealfon RSG, Sebra R, Simons MP, Soares-Schanoski A, Sugiharto V, Termini M, Vangeti S, Williams C, Troyanskaya OG, van Bakel H, Sealfon SC. Letizia AG, et al. N Engl J Med. 2020 Dec 17;383(25):2407-2416. doi: 10.1056/NEJMoa2029717. Epub 2020 Nov 11. N Engl J Med. 2020. PMID: 33176093 Free PMC article.
Real-Time Investigation of a Large Nosocomial Influenza A Outbreak Informed by Genomic Epidemiology.
Javaid W, Ehni J, Gonzalez-Reiche AS, Carreño JM, Hirsch E, Tan J, Khan Z, Kriti D, Ly T, Kranitzky B, Barnett B, Cera F, Prespa L, Moss M, Albrecht RA, Mustafa A, Herbison I, Hernandez MM, Pak TR, Alshammary HA, Sebra R, Smith ML, Krammer F, Gitman MR, Sordillo EM, Simon V, van Bakel H. Javaid W, et al. Clin Infect Dis. 2021 Dec 6;73(11):e4375-e4383. doi: 10.1093/cid/ciaa1781. Clin Infect Dis. 2021. PMID: 33252647 Free PMC article.
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