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Dnmt1 has de novo activity targeted to transposable elements.
Haggerty C, Kretzmer H, Riemenschneider C, Kumar AS, Mattei AL, Bailly N, Gottfreund J, Giesselmann P, Weigert R, Brändl B, Giehr P, Buschow R, Galonska C, von Meyenn F, Pappalardi MB, McCabe MT, Wittler L, Giesecke-Thiel C, Mielke T, Meierhofer D, Timmermann B, Müller FJ, Walter J, Meissner A. Haggerty C, et al. Among authors: muller fj. Nat Struct Mol Biol. 2021 Jul;28(7):594-603. doi: 10.1038/s41594-021-00603-8. Epub 2021 Jun 17. Nat Struct Mol Biol. 2021. PMID: 34140676 Free PMC article.
Generation of two human isogenic iPSC lines from fetal dermal fibroblasts.
Tandon R, Brändl B, Baryshnikova N, Landshammer A, Steenpaß L, Keminer O, Pless O, Müller FJ. Tandon R, et al. Among authors: muller fj. Stem Cell Res. 2018 Dec;33:120-124. doi: 10.1016/j.scr.2018.10.004. Epub 2018 Oct 12. Stem Cell Res. 2018. PMID: 30343101 Free article.
Nanopype: a modular and scalable nanopore data processing pipeline.
Giesselmann P, Hetzel S, Müller FJ, Meissner A, Kretzmer H. Giesselmann P, et al. Among authors: muller fj. Bioinformatics. 2019 Nov 1;35(21):4536. doi: 10.1093/bioinformatics/btz547. Bioinformatics. 2019. PMID: 31386105 No abstract available.
Analysis of short tandem repeat expansions and their methylation state with nanopore sequencing.
Giesselmann P, Brändl B, Raimondeau E, Bowen R, Rohrandt C, Tandon R, Kretzmer H, Assum G, Galonska C, Siebert R, Ammerpohl O, Heron A, Schneider SA, Ladewig J, Koch P, Schuldt BM, Graham JE, Meissner A, Müller FJ. Giesselmann P, et al. Among authors: muller fj. Nat Biotechnol. 2019 Dec;37(12):1478-1481. doi: 10.1038/s41587-019-0293-x. Epub 2019 Nov 18. Nat Biotechnol. 2019. PMID: 31740840
Enhanced cortical neural stem cell identity through short SMAD and WNT inhibition in human cerebral organoids facilitates emergence of outer radial glial cells.
Rosebrock D, Arora S, Mutukula N, Volkman R, Gralinska E, Balaskas A, Aragonés Hernández A, Buschow R, Brändl B, Müller FJ, Arndt PF, Vingron M, Elkabetz Y. Rosebrock D, et al. Among authors: muller fj. Nat Cell Biol. 2022 Jun;24(6):981-995. doi: 10.1038/s41556-022-00929-5. Epub 2022 Jun 13. Nat Cell Biol. 2022. PMID: 35697781 Free PMC article.
Dynamic antagonism between key repressive pathways maintains the placental epigenome.
Weigert R, Hetzel S, Bailly N, Haggerty C, Ilik IA, Yung PYK, Navarro C, Bolondi A, Kumar AS, Anania C, Brändl B, Meierhofer D, Lupiáñez DG, Müller FJ, Aktas T, Elsässer SJ, Kretzmer H, Smith ZD, Meissner A. Weigert R, et al. Among authors: muller fj. Nat Cell Biol. 2023 Apr;25(4):579-591. doi: 10.1038/s41556-023-01114-y. Epub 2023 Apr 6. Nat Cell Biol. 2023. PMID: 37024684 Free PMC article.
121 results