Sirota FL - Search Results

1

Factors influencing SARS-CoV-2 transmission and outbreak control measures in densely populated settings.

Pung R, Lin B, Maurer-Stroh S, Sirota FL, Mak TM, Octavia S, Pang J, Tan IB, Tan C, Ong BC, Cook AR; Singapore COVID-19 Outbreak Research Team; Lee VJ. Pung R, et al. Among authors: sirota fl. Sci Rep. 2021 Jul 27;11(1):15297. doi: 10.1038/s41598-021-94463-3. Sci Rep. 2021. PMID: 34315928 Free PMC article.

2

Epidemiological, Clinical, and Phylogenetic Characteristics of the First SARS-CoV-2 Transmission in a Nursing Home of Singapore: A Prospective Observational Investigation.

Pang J, Tan HN, Mak TM, Octavia S, Maurer-Stroh S, Sirota FL, Chan MPC, Leong IYO, Koh VTJ, Ooi PL, Vasoo S, Fisher D, Cui L, Rafman H, Cutter J, Lee VJ. Pang J, et al. Among authors: sirota fl. Front Med (Lausanne). 2022 Jan 28;8:790177. doi: 10.3389/fmed.2021.790177. eCollection 2021. Front Med (Lausanne). 2022. PMID: 35155470 Free PMC article.

3

Functional Classification of Super-Large Families of Enzymes Based on Substrate Binding Pocket Residues for Biocatalysis and Enzyme Engineering Applications.

Sirota FL, Maurer-Stroh S, Li Z, Eisenhaber F, Eisenhaber B. Sirota FL, et al. Front Bioeng Biotechnol. 2021 Aug 2;9:701120. doi: 10.3389/fbioe.2021.701120. eCollection 2021. Front Bioeng Biotechnol. 2021. PMID: 34409021 Free PMC article.

4

Mapping the sequence mutations of the 2009 H1N1 influenza A virus neuraminidase relative to drug and antibody binding sites.

Maurer-Stroh S, Ma J, Lee RT, Sirota FL, Eisenhaber F. Maurer-Stroh S, et al. Among authors: sirota fl. Biol Direct. 2009 May 20;4:18; discussion 18. doi: 10.1186/1745-6150-4-18. Biol Direct. 2009. PMID: 19457254 Free PMC article.

5

Integrated tools for biomolecular sequence-based function prediction as exemplified by the ANNOTATOR software environment.

Schneider G, Wildpaner M, Sirota FL, Maurer-Stroh S, Eisenhaber B, Eisenhaber F. Schneider G, et al. Among authors: sirota fl. Methods Mol Biol. 2010;609:257-67. doi: 10.1007/978-1-60327-241-4_15. Methods Mol Biol. 2010. PMID: 20221924

6

Single-residue posttranslational modification sites at the N-terminus, C-terminus or in-between: To be or not to be exposed for enzyme access.

Sirota FL, Maurer-Stroh S, Eisenhaber B, Eisenhaber F. Sirota FL, et al. Proteomics. 2015 Jul;15(14):2525-46. doi: 10.1002/pmic.201400633. Proteomics. 2015. PMID: 26038108 Free PMC article.

7

All that glitters is not gold--founder effects complicate associations of flu mutations to disease severity.

Lee RT, Santos CL, de Paiva TM, Cui L, Sirota FL, Eisenhaber F, Maurer-Stroh S. Lee RT, et al. Among authors: sirota fl. Virol J. 2010 Nov 1;7:297. doi: 10.1186/1743-422X-7-297. Virol J. 2010. PMID: 21040570 Free PMC article.

8

Parameterization of disorder predictors for large-scale applications requiring high specificity by using an extended benchmark dataset.

Sirota FL, Ooi HS, Gattermayer T, Schneider G, Eisenhaber F, Maurer-Stroh S. Sirota FL, et al. BMC Genomics. 2010 Feb 10;11 Suppl 1(Suppl 1):S15. doi: 10.1186/1471-2164-11-S1-S15. BMC Genomics. 2010. PMID: 20158872 Free PMC article.

9

Beware of moving targets: reference proteome content fluctuates substantially over the years.

Sirota FL, Batagov A, Schneider G, Eisenhaber B, Eisenhaber F, Maurer-Stroh S. Sirota FL, et al. J Bioinform Comput Biol. 2012 Dec;10(6):1250020. doi: 10.1142/S0219720012500205. Epub 2012 Aug 7. J Bioinform Comput Biol. 2012. PMID: 22867629

10

ANNIE: integrated de novo protein sequence annotation.

Ooi HS, Kwo CY, Wildpaner M, Sirota FL, Eisenhaber B, Maurer-Stroh S, Wong WC, Schleiffer A, Eisenhaber F, Schneider G. Ooi HS, et al. Among authors: sirota fl. Nucleic Acids Res. 2009 Jul;37(Web Server issue):W435-40. doi: 10.1093/nar/gkp254. Epub 2009 Apr 23. Nucleic Acids Res. 2009. PMID: 19389726 Free PMC article.

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