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Unravelling the collateral damage of antibiotics on gut bacteria.
Maier L, Goemans CV, Wirbel J, Kuhn M, Eberl C, Pruteanu M, Müller P, Garcia-Santamarina S, Cacace E, Zhang B, Gekeler C, Banerjee T, Anderson EE, Milanese A, Löber U, Forslund SK, Patil KR, Zimmermann M, Stecher B, Zeller G, Bork P, Typas A. Maier L, et al. Among authors: kuhn m. Nature. 2021 Nov;599(7883):120-124. doi: 10.1038/s41586-021-03986-2. Epub 2021 Oct 13. Nature. 2021. PMID: 34646011 Free PMC article.
STITCH: interaction networks of chemicals and proteins.
Kuhn M, von Mering C, Campillos M, Jensen LJ, Bork P. Kuhn M, et al. Nucleic Acids Res. 2008 Jan;36(Database issue):D684-8. doi: 10.1093/nar/gkm795. Epub 2007 Dec 15. Nucleic Acids Res. 2008. PMID: 18084021 Free PMC article.
Large-scale prediction of drug-target relationships.
Kuhn M, Campillos M, González P, Jensen LJ, Bork P. Kuhn M, et al. FEBS Lett. 2008 Apr 9;582(8):1283-90. doi: 10.1016/j.febslet.2008.02.024. Epub 2008 Feb 20. FEBS Lett. 2008. PMID: 18291108 Free article. Review.
Drug target identification using side-effect similarity.
Campillos M, Kuhn M, Gavin AC, Jensen LJ, Bork P. Campillos M, et al. Among authors: kuhn m. Science. 2008 Jul 11;321(5886):263-6. doi: 10.1126/science.1158140. Science. 2008. PMID: 18621671
Drug-induced regulation of target expression.
Iskar M, Campillos M, Kuhn M, Jensen LJ, van Noort V, Bork P. Iskar M, et al. Among authors: kuhn m. PLoS Comput Biol. 2010 Sep 9;6(9):e1000925. doi: 10.1371/journal.pcbi.1000925. PLoS Comput Biol. 2010. PMID: 20838579 Free PMC article.
STITCH 3: zooming in on protein-chemical interactions.
Kuhn M, Szklarczyk D, Franceschini A, von Mering C, Jensen LJ, Bork P. Kuhn M, et al. Nucleic Acids Res. 2012 Jan;40(Database issue):D876-80. doi: 10.1093/nar/gkr1011. Epub 2011 Nov 9. Nucleic Acids Res. 2012. PMID: 22075997 Free PMC article.
eggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic ranges.
Powell S, Szklarczyk D, Trachana K, Roth A, Kuhn M, Muller J, Arnold R, Rattei T, Letunic I, Doerks T, Jensen LJ, von Mering C, Bork P. Powell S, et al. Among authors: kuhn m. Nucleic Acids Res. 2012 Jan;40(Database issue):D284-9. doi: 10.1093/nar/gkr1060. Epub 2011 Nov 16. Nucleic Acids Res. 2012. PMID: 22096231 Free PMC article.
1,347 results