Scheuermann RH - Search Results

1

Corticosteroid treatment in COVID-19 modulates host inflammatory responses and transcriptional signatures of immune dysregulation.

Pinski AN, Steffen TL, Zulu MZ, George SL, Dickson A, Tifrea D, Maroney KJ, Tedeschi N, Zhang Y, Scheuermann RH, Pinto AK, Brien JD, Messaoudi I. Pinski AN, et al. Among authors: scheuermann rh. J Leukoc Biol. 2021 Dec;110(6):1225-1239. doi: 10.1002/JLB.4COVA0121-084RR. Epub 2021 Nov 3. J Leukoc Biol. 2021. PMID: 34730254 Free PMC article.

2

Hepatitis C Virus Database and Bioinformatics Analysis Tools in the Virus Pathogen Resource (ViPR).

Zhang Y, Zmasek C, Sun G, Larsen CN, Scheuermann RH. Zhang Y, et al. Among authors: scheuermann rh. Methods Mol Biol. 2019;1911:47-69. doi: 10.1007/978-1-4939-8976-8_3. Methods Mol Biol. 2019. PMID: 30593617

3

A Sequence Homology and Bioinformatic Approach Can Predict Candidate Targets for Immune Responses to SARS-CoV-2.

Grifoni A, Sidney J, Zhang Y, Scheuermann RH, Peters B, Sette A. Grifoni A, et al. Among authors: scheuermann rh. Cell Host Microbe. 2020 Apr 8;27(4):671-680.e2. doi: 10.1016/j.chom.2020.03.002. Epub 2020 Mar 16. Cell Host Microbe. 2020. PMID: 32183941 Free PMC article.

4

Candidate Targets for Immune Responses to 2019-Novel Coronavirus (nCoV): Sequence Homology- and Bioinformatic-Based Predictions.

Grifoni A, Sidney J, Zhang Y, Scheuermann RH, Peters B, Sette A. Grifoni A, et al. Among authors: scheuermann rh. SSRN [Preprint]. 2020 Feb 25:3541361. doi: 10.2139/ssrn.3541361. SSRN. 2020. PMID: 32714104 Free PMC article. Updated. Preprint.

5

FR-Match: robust matching of cell type clusters from single cell RNA sequencing data using the Friedman-Rafsky non-parametric test.

Zhang Y, Aevermann BD, Bakken TE, Miller JA, Hodge RD, Lein ES, Scheuermann RH. Zhang Y, et al. Among authors: scheuermann rh. Brief Bioinform. 2021 Jul 20;22(4):bbaa339. doi: 10.1093/bib/bbaa339. Brief Bioinform. 2021. PMID: 33249453 Free PMC article.

6

Epidemiology and Sequence-Based Evolutionary Analysis of Circulating Non-Polio Enteroviruses.

Brown DM, Zhang Y, Scheuermann RH. Brown DM, et al. Among authors: scheuermann rh. Microorganisms. 2020 Nov 25;8(12):1856. doi: 10.3390/microorganisms8121856. Microorganisms. 2020. PMID: 33255654 Free PMC article. Review.

7

A machine learning method for the discovery of minimum marker gene combinations for cell type identification from single-cell RNA sequencing.

Aevermann B, Zhang Y, Novotny M, Keshk M, Bakken T, Miller J, Hodge R, Lelieveldt B, Lein E, Scheuermann RH. Aevermann B, et al. Among authors: scheuermann rh. Genome Res. 2021 Oct;31(10):1767-1780. doi: 10.1101/gr.275569.121. Epub 2021 Jun 4. Genome Res. 2021. PMID: 34088715 Free PMC article.

8

Impact of SARS-CoV-2 variants on the total CD4⁺ and CD8⁺ T cell reactivity in infected or vaccinated individuals.

Tarke A, Sidney J, Methot N, Yu ED, Zhang Y, Dan JM, Goodwin B, Rubiro P, Sutherland A, Wang E, Frazier A, Ramirez SI, Rawlings SA, Smith DM, da Silva Antunes R, Peters B, Scheuermann RH, Weiskopf D, Crotty S, Grifoni A, Sette A. Tarke A, et al. Among authors: scheuermann rh. Cell Rep Med. 2021 Jul 20;2(7):100355. doi: 10.1016/j.xcrm.2021.100355. Epub 2021 Jul 2. Cell Rep Med. 2021. PMID: 34230917 Free PMC article.

9

Cell type matching in single-cell RNA-sequencing data using FR-Match.

Zhang Y, Aevermann B, Gala R, Scheuermann RH. Zhang Y, et al. Among authors: scheuermann rh. Sci Rep. 2022 Jun 15;12(1):9996. doi: 10.1038/s41598-022-14192-z. Sci Rep. 2022. PMID: 35705694 Free PMC article.

10

Animal Models of Enterovirus D68 Infection and Disease.

Vermillion MS, Dearing J, Zhang Y, Adney DR, Scheuermann RH, Pekosz A, Tarbet EB. Vermillion MS, et al. Among authors: scheuermann rh. J Virol. 2022 Aug 10;96(15):e0083322. doi: 10.1128/jvi.00833-22. Epub 2022 Jul 19. J Virol. 2022. PMID: 35852353 Free PMC article. Review.

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