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Towards nationally curated data archives for clinical radiology image analysis at scale: Learnings from national data collection in response to a pandemic.
Cushnan D, Berka R, Bertolli O, Williams P, Schofield D, Joshi I, Favaro A, Halling-Brown M, Imreh G, Jefferson E, Sebire NJ, Reilly G, Rodrigues JCL, Robinson G, Copley S, Malik R, Bloomfield C, Gleeson F, Crotty M, Denton E, Dickson J, Leeming G, Hardwick HE, Baillie K, Openshaw PJ, Semple MG, Rubin C, Howlett A, Rockall AG, Bhayat A, Fascia D, Sudlow C; NCCID Collaborative; Jacob J. Cushnan D, et al. Among authors: berka r. Digit Health. 2021 Nov 23;7:20552076211048654. doi: 10.1177/20552076211048654. eCollection 2021 Jan-Dec. Digit Health. 2021. PMID: 34868617 Free PMC article.
Using imaging to combat a pandemic: rationale for developing the UK National COVID-19 Chest Imaging Database.
Jacob J, Alexander D, Baillie JK, Berka R, Bertolli O, Blackwood J, Buchan I, Bloomfield C, Cushnan D, Docherty A, Edey A, Favaro A, Gleeson F, Halling-Brown M, Hare S, Jefferson E, Johnstone A, Kirby M, McStay R, Nair A, Openshaw PJM, Parker G, Reilly G, Robinson G, Roditi G, Rodrigues JCL, Sebire N, Semple MG, Sudlow C, Woznitza N, Joshi I. Jacob J, et al. Among authors: berka r. Eur Respir J. 2020 Aug 13;56(2):2001809. doi: 10.1183/13993003.01809-2020. Print 2020 Aug. Eur Respir J. 2020. PMID: 32616598 Free PMC article. Review.
An overview of the National COVID-19 Chest Imaging Database: data quality and cohort analysis.
Cushnan D, Bennett O, Berka R, Bertolli O, Chopra A, Dorgham S, Favaro A, Ganepola T, Halling-Brown M, Imreh G, Jacob J, Jefferson E, Lemarchand F, Schofield D, Wyatt JC; NCCID Collaborative. Cushnan D, et al. Among authors: berka r. Gigascience. 2021 Nov 25;10(11):giab076. doi: 10.1093/gigascience/giab076. Gigascience. 2021. PMID: 34849869 Free PMC article. Review.
Erratum to: An overview of the National COVID-19 Chest Imaging Database: data quality and cohort analysis.
Cushnan D, Bennett O, Berka R, Bertolli O, Chopra A, Dorgham S, Favaro A, Ganepola T, Halling-Brown M, Imreh G, Jacob J, Jefferson E, Lemarchand F, Schofield D, Wyatt JC, Collaborative NCCID. Cushnan D, et al. Among authors: berka r. Gigascience. 2021 Dec 1;10(12):giab083. doi: 10.1093/gigascience/giab083. Gigascience. 2021. PMID: 34850874 Free PMC article. No abstract available.
Draft genome sequence of a monokaryotic model brown-rot fungus Postia (Rhodonia) placenta SB12.
Gaskell J, Kersten P, Larrondo LF, Canessa P, Martinez D, Hibbett D, Schmoll M, Kubicek CP, Martinez AT, Yadav J, Master E, Magnuson JK, Yaver D, Berka R, Lail K, Chen C, LaButti K, Nolan M, Lipzen A, Aerts A, Riley R, Barry K, Henrissat B, Blanchette R, Grigoriev IV, Cullen D. Gaskell J, et al. Among authors: berka r. Genom Data. 2017 Aug 10;14:21-23. doi: 10.1016/j.gdata.2017.08.003. eCollection 2017 Dec. Genom Data. 2017. PMID: 28831381 Free PMC article. No abstract available.
The first European cave fish.
Behrmann-Godel J, Nolte AW, Kreiselmaier J, Berka R, Freyhof J. Behrmann-Godel J, et al. Among authors: berka r. Curr Biol. 2017 Apr 3;27(7):R257-R258. doi: 10.1016/j.cub.2017.02.048. Curr Biol. 2017. PMID: 28376329 Free article.
Analysis of the Phlebiopsis gigantea genome, transcriptome and secretome provides insight into its pioneer colonization strategies of wood.
Hori C, Ishida T, Igarashi K, Samejima M, Suzuki H, Master E, Ferreira P, Ruiz-Dueñas FJ, Held B, Canessa P, Larrondo LF, Schmoll M, Druzhinina IS, Kubicek CP, Gaskell JA, Kersten P, St John F, Glasner J, Sabat G, Splinter BonDurant S, Syed K, Yadav J, Mgbeahuruike AC, Kovalchuk A, Asiegbu FO, Lackner G, Hoffmeister D, Rencoret J, Gutiérrez A, Sun H, Lindquist E, Barry K, Riley R, Grigoriev IV, Henrissat B, Kües U, Berka RM, Martínez AT, Covert SF, Blanchette RA, Cullen D. Hori C, et al. Among authors: berka rm. PLoS Genet. 2014 Dec 4;10(12):e1004759. doi: 10.1371/journal.pgen.1004759. eCollection 2014 Dec. PLoS Genet. 2014. PMID: 25474575 Free PMC article.
55 results