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Coronavirus GenBrowser for monitoring the transmission and evolution of SARS-CoV-2.
Yu D, Yang X, Tang B, Pan YH, Yang J, Duan G, Zhu J, Hao ZQ, Mu H, Dai L, Hu W, Zhang M, Cui Y, Jin T, Li CP, Ma L; Language translation team; Su X, Zhang G, Zhao W, Li H. Yu D, et al. Among authors: yang x, yang j. Brief Bioinform. 2022 Mar 10;23(2):bbab583. doi: 10.1093/bib/bbab583. Brief Bioinform. 2022. PMID: 35043153 Free PMC article.
eGPS 1.0: comprehensive software for multi-omic and evolutionary analyses.
Yu D, Dong L, Yan F, Mu H, Tang B, Yang X, Zeng T, Zhou Q, Gao F, Wang Z, Hao Z, Kang H, Zheng Y, Huang H, Wei Y, Pan W, Xu Y, Zhu J, Zhao S, Wang C, Wang P, Dai L, Li M, Lan L, Wang Y, Chen H, Li YX, Fu YX, Shao Z, Bao Y, Zhao F, Chen LN, Zhang GQ, Zhao W, Li H. Yu D, et al. Among authors: yang x. Natl Sci Rev. 2019 Oct;6(5):867-869. doi: 10.1093/nsr/nwz079. Epub 2019 Jun 18. Natl Sci Rev. 2019. PMID: 34691944 Free PMC article. No abstract available.
PGG.Han: the Han Chinese genome database and analysis platform.
Gao Y, Zhang C, Yuan L, Ling Y, Wang X, Liu C, Pan Y, Zhang X, Ma X, Wang Y, Lu Y, Yuan K, Ye W, Qian J, Chang H, Cao R, Yang X, Ma L, Ju Y, Dai L, Tang Y; Han100K Initiative; Zhang G, Xu S. Gao Y, et al. Among authors: yang x. Nucleic Acids Res. 2020 Jan 8;48(D1):D971-D976. doi: 10.1093/nar/gkz829. Nucleic Acids Res. 2020. PMID: 31584086 Free PMC article.
Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak.
Gire SK, Goba A, Andersen KG, Sealfon RS, Park DJ, Kanneh L, Jalloh S, Momoh M, Fullah M, Dudas G, Wohl S, Moses LM, Yozwiak NL, Winnicki S, Matranga CB, Malboeuf CM, Qu J, Gladden AD, Schaffner SF, Yang X, Jiang PP, Nekoui M, Colubri A, Coomber MR, Fonnie M, Moigboi A, Gbakie M, Kamara FK, Tucker V, Konuwa E, Saffa S, Sellu J, Jalloh AA, Kovoma A, Koninga J, Mustapha I, Kargbo K, Foday M, Yillah M, Kanneh F, Robert W, Massally JL, Chapman SB, Bochicchio J, Murphy C, Nusbaum C, Young S, Birren BW, Grant DS, Scheiffelin JS, Lander ES, Happi C, Gevao SM, Gnirke A, Rambaut A, Garry RF, Khan SH, Sabeti PC. Gire SK, et al. Among authors: yang x. Science. 2014 Sep 12;345(6202):1369-72. doi: 10.1126/science.1259657. Epub 2014 Aug 28. Science. 2014. PMID: 25214632 Free PMC article.
De novo assembly of highly diverse viral populations.
Yang X, Charlebois P, Gnerre S, Coole MG, Lennon NJ, Levin JZ, Qu J, Ryan EM, Zody MC, Henn MR. Yang X, et al. BMC Genomics. 2012 Sep 13;13:475. doi: 10.1186/1471-2164-13-475. BMC Genomics. 2012. PMID: 22974120 Free PMC article.
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