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Selection analysis identifies unusual clustered mutational changes in Omicron lineage BA.1 that likely impact Spike function.
Martin DP, Lytras S, Lucaci AG, Maier W, Grüning B, Shank SD, Weaver S, MacLean OA, Orton RJ, Lemey P, Boni MF, Tegally H, Harkins G, Scheepers C, Bhiman JN, Everatt J, Amoako DG, San JE, Giandhari J, Sigal A; NGS-SA; Williamson C, Hsiao NY, von Gottberg A, De Klerk A, Shafer RW, Robertson DL, Wilkinson RJ, Sewell BT, Lessells R, Nekrutenko A, Greaney AJ, Starr TN, Bloom JD, Murrell B, Wilkinson E, Gupta RK, de Oliveira T, Kosakovsky Pond SL. Martin DP, et al. Among authors: boni mf. bioRxiv [Preprint]. 2022 Jan 18:2022.01.14.476382. doi: 10.1101/2022.01.14.476382. bioRxiv. 2022. PMID: 35075456 Free PMC article. Updated. Preprint.
Global risk of selection and spread of Plasmodium falciparum histidine-rich protein 2 and 3 gene deletions.
Watson OJ, Tran TN, Zupko RJ, Symons T, Thomson R, Visser T, Rumisha S, Dzianach PA, Hathaway N, Kim I, Juliano JJ, Bailey JA, Slater H, Okell L, Gething P, Ghani A, Boni MF, Parr JB, Cunningham J. Watson OJ, et al. Among authors: boni mf. medRxiv [Preprint]. 2024 Jan 1:2023.10.21.23297352. doi: 10.1101/2023.10.21.23297352. medRxiv. 2024. PMID: 37905102 Free PMC article. Preprint.
A combination of annual and nonannual forces drive respiratory disease in the tropics.
Yang F, Servadio JL, Le Thanh NT, Lam HM, Choisy M, Thai PQ, Nhu Thao TT, Thao Vy NH, Phuong HT, Nguyen TD, Hoai Tam DT, Hanks EM, Vinh H, Bjornstad ON, Van Vinh Chau N, Boni MF. Yang F, et al. Among authors: boni mf. medRxiv [Preprint]. 2023 Mar 29:2023.03.28.23287862. doi: 10.1101/2023.03.28.23287862. medRxiv. 2023. PMID: 37034752 Free PMC article. Updated. Preprint.
SARS-CoV-2 epidemic after social and economic reopening in three US states reveals shifts in age structure and clinical characteristics.
Wikle N, Tran TN, Gentilesco B, Leighow SM, Albert J, Strong ER, Břinda K, Inam H, Yang F, Hossain S, Chan P, Hanage WP, Messick M, Pritchard JR, Hanks EM, Boni MF. Wikle N, et al. Among authors: boni mf. medRxiv [Preprint]. 2021 Nov 6:2020.11.17.20232918. doi: 10.1101/2020.11.17.20232918. medRxiv. 2021. PMID: 34426816 Free PMC article. Updated. Preprint.
Age-dependent heterogeneity in the antigenic effects of mutations to influenza hemagglutinin.
Welsh FC, Eguia RT, Lee JM, Haddox HK, Galloway J, Chau NVV, Loes AN, Huddleston J, Yu TC, Le MQ, Nhat NTD, Thanh NTL, Greninger AL, Chu HY, Englund JA, Bedford T, Matsen FA 4th, Boni MF, Bloom JD. Welsh FC, et al. Among authors: boni mf. bioRxiv [Preprint]. 2023 Dec 12:2023.12.12.571235. doi: 10.1101/2023.12.12.571235. bioRxiv. 2023. PMID: 38168237 Free PMC article. Preprint.
120 results