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Deep Convolutional Neural Networks Implementation for the Analysis of Urine Culture.
Clin Chem. 2022 Mar 31;68(4):574-583. doi: 10.1093/clinchem/hvab270.
Clin Chem. 2022.
PMID: 35134116
Specificity of SARS-CoV-2 Real-Time PCR Improved by Deep Learning Analysis.
Alouani DJ, Rajapaksha RRP, Jani M, Rhoads DD, Sadri N.
Alouani DJ, et al.
J Clin Microbiol. 2021 May 19;59(6):e02959-20. doi: 10.1128/JCM.02959-20. Print 2021 May 19.
J Clin Microbiol. 2021.
PMID: 33731417
Free PMC article.
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Helicobacter pylori Mutations Detected by Next-Generation Sequencing in Formalin-Fixed, Paraffin-Embedded Gastric Biopsy Specimens Are Associated with Treatment Failure.
Nezami BG, Jani M, Alouani D, Rhoads DD, Sadri N.
Nezami BG, et al.
J Clin Microbiol. 2019 Jun 25;57(7):e01834-18. doi: 10.1128/JCM.01834-18. Print 2019 Jul.
J Clin Microbiol. 2019.
PMID: 31068413
Free PMC article.
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High-Throughput Adaptable SARS-CoV-2 Screening for Rapid Identification of Dominant and Emerging Regional Variants.
Hubler Z, Song X, Norris C, Jani M, Alouani D, Atchley M, Stempak L, Cherian S, Schmotzer C, Sadri N.
Hubler Z, et al.
Am J Clin Pathol. 2022 Jun 7;157(6):927-935. doi: 10.1093/ajcp/aqab212.
Am J Clin Pathol. 2022.
PMID: 34999740
Free PMC article.
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Comparison of cytocentrifugation supernatant fluid and formalin-fixed paraffin-embedded tissue for targeted next-generation sequencing.
Janaki N, Harbhajanka A, Michael CW, Bomeisl P, Wasman J, Atchley M, Miskiewicz K, Alouani D, Sadri N.
Janaki N, et al.
Cancer Cytopathol. 2019 May;127(5):297-305. doi: 10.1002/cncy.22126. Epub 2019 Apr 1.
Cancer Cytopathol. 2019.
PMID: 30933438
Free article.
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Characterization of minority HIV-1 drug resistant variants in the United Kingdom following the verification of a deep sequencing-based HIV-1 genotyping and tropism assay.
Silver N, Paynter M, McAllister G, Atchley M, Sayir C, Short J, Winner D, Alouani DJ, Sharkey FH, Bergefall K, Templeton K, Carrington D, Quiñones-Mateu ME.
Silver N, et al. Among authors: alouani dj.
AIDS Res Ther. 2018 Nov 8;15(1):18. doi: 10.1186/s12981-018-0206-y.
AIDS Res Ther. 2018.
PMID: 30409215
Free PMC article.
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Impaired human immunodeficiency virus type 1 replicative fitness in atypical viremic non-progressor individuals.
Weber J, Gibson RM, Sácká L, Strunin D, Hodek J, Weberová J, Pávová M, Alouani DJ, Asaad R, Rodriguez B, Lederman MM, Quiñones-Mateu ME.
Weber J, et al. Among authors: alouani dj.
AIDS Res Ther. 2017 Mar 20;14:15. doi: 10.1186/s12981-017-0144-0. eCollection 2017.
AIDS Res Ther. 2017.
PMID: 28331526
Free PMC article.
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