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Emergence of SARS-CoV-2 Omicron lineages BA.4 and BA.5 in South Africa.
Tegally H, Moir M, Everatt J, Giovanetti M, Scheepers C, Wilkinson E, Subramoney K, Makatini Z, Moyo S, Amoako DG, Baxter C, Althaus CL, Anyaneji UJ, Kekana D, Viana R, Giandhari J, Lessells RJ, Maponga T, Maruapula D, Choga W, Matshaba M, Mbulawa MB, Msomi N; NGS-SA consortium; Naidoo Y, Pillay S, Sanko TJ, San JE, Scott L, Singh L, Magini NA, Smith-Lawrence P, Stevens W, Dor G, Tshiabuila D, Wolter N, Preiser W, Treurnicht FK, Venter M, Chiloane G, McIntyre C, O'Toole A, Ruis C, Peacock TP, Roemer C, Kosakovsky Pond SL, Williamson C, Pybus OG, Bhiman JN, Glass A, Martin DP, Jackson B, Rambaut A, Laguda-Akingba O, Gaseitsiwe S, von Gottberg A, de Oliveira T. Tegally H, et al. Among authors: martin dp. Nat Med. 2022 Sep;28(9):1785-1790. doi: 10.1038/s41591-022-01911-2. Epub 2022 Jun 27. Nat Med. 2022. PMID: 35760080 Free PMC article.
HIV type 1 subtype C gag and nef diversity in Southern Africa.
Bredell H, Martin DP, Van Harmelen J, Varsani A, Sheppard HW, Donovan R, Gray CM; HIVNET028 Study Team; Williamson C. Bredell H, et al. Among authors: martin dp. AIDS Res Hum Retroviruses. 2007 Mar;23(3):477-81. doi: 10.1089/aid.2006.0232. AIDS Res Hum Retroviruses. 2007. PMID: 17411382
Conserved positive selection signals in gp41 across multiple subtypes and difference in selection signals detectable in gp41 sequences sampled during acute and chronic HIV-1 subtype C infection.
Bandawe GP, Martin DP, Treurnicht F, Mlisana K, Karim SS, Williamson C; CAPRISA 002 Acute Infection Study Team. Bandawe GP, et al. Among authors: martin dp. Virol J. 2008 Nov 24;5:141. doi: 10.1186/1743-422X-5-141. Virol J. 2008. PMID: 19025632 Free PMC article.
Gene-wide identification of episodic selection.
Murrell B, Weaver S, Smith MD, Wertheim JO, Murrell S, Aylward A, Eren K, Pollner T, Martin DP, Smith DM, Scheffler K, Kosakovsky Pond SL. Murrell B, et al. Among authors: martin dp. Mol Biol Evol. 2015 May;32(5):1365-71. doi: 10.1093/molbev/msv035. Epub 2015 Feb 19. Mol Biol Evol. 2015. PMID: 25701167 Free PMC article.
615 results