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A phylogenomic framework for assessing the global emergence and evolution of clonal complex 398 methicillin-resistant Staphylococcus aureus.
Gonçalves da Silva A, Baines SL, Carter GP, Heffernan H, French NP, Ren X, Seemann T, Bulach D, Kwong J, Stinear TP, Howden BP, Williamson DA. Gonçalves da Silva A, et al. Microb Genom. 2017 Jan 31;3(1):e000105. doi: 10.1099/mgen.0.000105. eCollection 2017 Jan. Microb Genom. 2017. PMID: 28348878 Free PMC article.
COVID-19 in New Zealand and the impact of the national response: a descriptive epidemiological study.
Jefferies S, French N, Gilkison C, Graham G, Hope V, Marshall J, McElnay C, McNeill A, Muellner P, Paine S, Prasad N, Scott J, Sherwood J, Yang L, Priest P. Jefferies S, et al. Among authors: french n. Lancet Public Health. 2020 Nov;5(11):e612-e623. doi: 10.1016/S2468-2667(20)30225-5. Epub 2020 Oct 14. Lancet Public Health. 2020. PMID: 33065023 Free PMC article.
Genomic epidemiology reveals transmission patterns and dynamics of SARS-CoV-2 in Aotearoa New Zealand.
Geoghegan JL, Ren X, Storey M, Hadfield J, Jelley L, Jefferies S, Sherwood J, Paine S, Huang S, Douglas J, Mendes FK, Sporle A, Baker MG, Murdoch DR, French N, Simpson CR, Welch D, Drummond AJ, Holmes EC, Duchêne S, de Ligt J. Geoghegan JL, et al. Among authors: french n. Nat Commun. 2020 Dec 11;11(1):6351. doi: 10.1038/s41467-020-20235-8. Nat Commun. 2020. PMID: 33311501 Free PMC article.
Genomic Evidence of In-Flight Transmission of SARS-CoV-2 Despite Predeparture Testing.
Swadi T, Geoghegan JL, Devine T, McElnay C, Sherwood J, Shoemack P, Ren X, Storey M, Jefferies S, Smit E, Hadfield J, Kenny A, Jelley L, Sporle A, McNeill A, Reynolds GE, Mouldey K, Lowe L, Sonder G, Drummond AJ, Huang S, Welch D, Holmes EC, French N, Simpson CR, de Ligt J. Swadi T, et al. Among authors: french n. Emerg Infect Dis. 2021 Mar;27(3):687-693. doi: 10.3201/eid2703.204714. Epub 2021 Jan 5. Emerg Infect Dis. 2021. PMID: 33400642 Free PMC article. Review.
Use of Genomics to Track Coronavirus Disease Outbreaks, New Zealand.
Geoghegan JL, Douglas J, Ren X, Storey M, Hadfield J, Silander OK, Freed NE, Jelley L, Jefferies S, Sherwood J, Paine S, Huang S, Sporle A, Baker MG, Murdoch DR, Drummond AJ, Welch D, Simpson CR, French N, Holmes EC, de Ligt J. Geoghegan JL, et al. Among authors: french n. Emerg Infect Dis. 2021 May;27(5):1317-1322. doi: 10.3201/eid2705.204579. Emerg Infect Dis. 2021. PMID: 33900175 Free PMC article.
787 results