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Single cell sequencing identifies clonally expanded synovial CD4+ TPH cells expressing GPR56 in rheumatoid arthritis.
Nat Commun. 2022 Jul 13;13(1):4046. doi: 10.1038/s41467-022-31519-6.
Nat Commun. 2022.
PMID: 35831277
Free PMC article.
Identification of a broadly fibrogenic macrophage subset induced by type 3 inflammation.
Fabre T, Barron AMS, Christensen SM, Asano S, Bound K, Lech MP, Wadsworth MH 2nd, Chen X, Wang C, Wang J, McMahon J, Schlerman F, White A, Kravarik KM, Fisher AJ, Borthwick LA, Hart KM, Henderson NC, Wynn TA, Dower K.
Fabre T, et al. Among authors: kravarik km.
Sci Immunol. 2023 Apr 14;8(82):eadd8945. doi: 10.1126/sciimmunol.add8945. Epub 2023 Apr 7.
Sci Immunol. 2023.
PMID: 37027478
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Stricturing Crohn's Disease Single-Cell RNA Sequencing Reveals Fibroblast Heterogeneity and Intercellular Interactions.
Mukherjee PK, Nguyen QT, Li J, Zhao S, Christensen SM, West GA, Chandra J, Gordon IO, Lin S, Wang J, Mao R, Czarnecki D, Rayan C, Goren I, Banerjee S, Kotak P, Plesec T, Lal S, Fabre T, Asano S, Bound K, Hart K, Park C, Martinez R, Dower K, Wynn TA, Hu S, Naydenov N, Decaris M, Turner S, Holubar SD, Steele SR, Fiocchi C, Ivanov AI, Kravarik KM, Rieder F.
Mukherjee PK, et al. Among authors: kravarik km.
Gastroenterology. 2023 Nov;165(5):1180-1196. doi: 10.1053/j.gastro.2023.07.014. Epub 2023 Jul 26.
Gastroenterology. 2023.
PMID: 37507073
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Single-cell isolation from full-thickness human intestinal tissue resections for single-cell RNA sequencing.
West GA, Zhao S, Nguyen QT, Christensen SM, Gordon IO, Holubar SD, Kravarik KM, Fiocchi C, Mukherjee PK, Rieder F.
West GA, et al. Among authors: kravarik km.
STAR Protoc. 2023 Dec 15;4(4):102686. doi: 10.1016/j.xpro.2023.102686. Epub 2023 Nov 4.
STAR Protoc. 2023.
PMID: 37925636
Free PMC article.
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Stricturing Crohn's disease single-cell RNA sequencing reveals fibroblast heterogeneity and intercellular interactions.
Mukherjee PK, Nguyen QT, Li J, Zhao S, Christensen SM, West GA, Chandra J, Gordon IO, Lin S, Wang J, Mao R, Czarnecki D, Rayan C, Kotak P, Plesec T, Lal S, Fabre T, Asano S, Bound K, Hart K, Park C, Martinez R, Dower K, Wynn TA, Hu S, Naydenov N, Decaris M, Turner S, Holubar SD, Steele SR, Fiocchi C, Ivanov AI, Kravarik KM, Rieder F.
Mukherjee PK, et al. Among authors: kravarik km.
bioRxiv [Preprint]. 2023 Apr 4:2023.04.03.534781. doi: 10.1101/2023.04.03.534781.
bioRxiv. 2023.
PMID: 37066202
Free PMC article.
Updated.
Preprint.
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foxF-1 Controls Specification of Non-body Wall Muscle and Phagocytic Cells in Planarians.
Scimone ML, Wurtzel O, Malecek K, Fincher CT, Oderberg IM, Kravarik KM, Reddien PW.
Scimone ML, et al. Among authors: kravarik km.
Curr Biol. 2018 Dec 3;28(23):3787-3801.e6. doi: 10.1016/j.cub.2018.10.030. Epub 2018 Nov 21.
Curr Biol. 2018.
PMID: 30471994
Free PMC article.
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Cell type transcriptome atlas for the planarian Schmidtea mediterranea.
Fincher CT, Wurtzel O, de Hoog T, Kravarik KM, Reddien PW.
Fincher CT, et al. Among authors: kravarik km.
Science. 2018 May 25;360(6391):eaaq1736. doi: 10.1126/science.aaq1736. Epub 2018 Apr 19.
Science. 2018.
PMID: 29674431
Free PMC article.
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Neoblast specialization in regeneration of the planarian Schmidtea mediterranea.
Scimone ML, Kravarik KM, Lapan SW, Reddien PW.
Scimone ML, et al. Among authors: kravarik km.
Stem Cell Reports. 2014 Aug 12;3(2):339-52. doi: 10.1016/j.stemcr.2014.06.001. Epub 2014 Jul 4.
Stem Cell Reports. 2014.
PMID: 25254346
Free PMC article.
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