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Page 1
Precise reconstruction of the TME using bulk RNA-seq and a machine learning algorithm trained on artificial transcriptomes.
Zaitsev A, Chelushkin M, Dyikanov D, Cheremushkin I, Shpak B, Nomie K, Zyrin V, Nuzhdina E, Lozinsky Y, Zotova A, Degryse S, Kotlov N, Baisangurov A, Shatsky V, Afenteva D, Kuznetsov A, Paul SR, Davies DL, Reeves PM, Lanuti M, Goldberg MF, Tazearslan C, Chasse M, Wang I, Abdou M, Aslanian SM, Andrewes S, Hsieh JJ, Ramachandran A, Lyu Y, Galkin I, Svekolkin V, Cerchietti L, Poznansky MC, Ataullakhanov R, Fowler N, Bagaev A. Zaitsev A, et al. Among authors: shpak b. Cancer Cell. 2022 Aug 8;40(8):879-894.e16. doi: 10.1016/j.ccell.2022.07.006. Cancer Cell. 2022. PMID: 35944503 Free article.
Comprehensive peripheral blood immunoprofiling reveals five immunotypes with immunotherapy response characteristics in patients with cancer.
Dyikanov D, Zaitsev A, Vasileva T, Wang I, Sokolov AA, Bolshakov ES, Frank A, Turova P, Golubeva O, Gantseva A, Kamysheva A, Shpudeiko P, Krauz I, Abdou M, Chasse M, Conroy T, Merriam NR, Alesse JE, English N, Shpak B, Shchetsova A, Tikhonov E, Filatov I, Radko A, Bolshakova A, Kachalova A, Lugovykh N, Bulahov A, Kilina A, Asanbekov S, Zheleznyak I, Skoptsov P, Alekseeva E, Johnson JM, Curry JM, Linnenbach AJ, South AP, Yang E, Morozov K, Terenteva A, Nigmatullina L, Fastovetz D, Bobe A, Balabanian L, Nomie K, Yong ST, Davitt CJH, Ryabykh A, Kudryashova O, Tazearslan C, Bagaev A, Fowler N, Luginbuhl AJ, Ataullakhanov RI, Goldberg MF. Dyikanov D, et al. Among authors: shpak b. Cancer Cell. 2024 May 13;42(5):759-779.e12. doi: 10.1016/j.ccell.2024.04.008. Cancer Cell. 2024. PMID: 38744245 Free article.
Microbiome-mediated incapacitation of interferon lambda production in the oral mucosa.
Rodriguez-Hernandez CJ, Sokoloski KJ, Stocke KS, Dukka H, Jin S, Metzler MA, Zaitsev K, Shpak B, Shen D, Miller DP, Artyomov MN, Lamont RJ, Bagaitkar J. Rodriguez-Hernandez CJ, et al. Among authors: shpak b. Proc Natl Acad Sci U S A. 2021 Dec 21;118(51):e2105170118. doi: 10.1073/pnas.2105170118. Proc Natl Acad Sci U S A. 2021. PMID: 34921113 Free PMC article.
G-EYE colonoscopy is superior to standard colonoscopy for increasing adenoma detection rate: an international randomized controlled trial (with videos).
Shirin H, Shpak B, Epshtein J, Karstensen JG, Hoffman A, de Ridder R, Testoni PA, Ishaq S, Reddy DN, Gross SA, Neumann H, Goetz M, Abramowich D, Moshkowitz M, Mizrahi M, Vilmann P, Rey JW, Sanduleanu-Dascalescu S, Viale E, Chaudhari H, Pochapin MB, Yair M, Shnell M, Yaari S, Hendel JW, Teubner D, Bogie RMM, Notaristefano C, Simantov R, Gluck N, Israeli E, Stigaard T, Matalon S, Vilkin A, Benson A, Sloth S, Maliar A, Waizbard A, Jacob H, Thielsen P, Shachar E, Rochberger S, Hershcovici T, Plougmann JI, Braverman M, Tsvang E, Abedi AA, Brachman Y, Siersema PD, Kiesslich R. Shirin H, et al. Among authors: shpak b. Gastrointest Endosc. 2019 Mar;89(3):545-553. doi: 10.1016/j.gie.2018.09.028. Epub 2018 Sep 28. Gastrointest Endosc. 2019. PMID: 30273591 Free article. Clinical Trial.
A novel prepless X-ray imaging capsule for colon cancer screening.
Gluck N, Shpak B, Brun R, Rösch T, Arber N, Moshkowitz M. Gluck N, et al. Among authors: shpak b. Gut. 2016 Mar;65(3):371-3. doi: 10.1136/gutjnl-2015-310893. Epub 2015 Dec 1. Gut. 2016. PMID: 26628510 Free PMC article. No abstract available.
Comparison of adenoma detection and miss rates between a novel balloon colonoscope and standard colonoscopy: a randomized tandem study.
Halpern Z, Gross SA, Gralnek IM, Shpak B, Pochapin M, Hoffman A, Mizrahi M, Rochberger YS, Moshkowitz M, Santo E, Melhem A, Grinshpon R, Pfefer J, Kiesslich R. Halpern Z, et al. Among authors: shpak b. Endoscopy. 2015 Apr;47(4):301. doi: 10.1055/s-0034-1391894. Epub 2015 Mar 31. Endoscopy. 2015. PMID: 25826167 No abstract available.
Comparison of adenoma detection and miss rates between a novel balloon colonoscope and standard colonoscopy: a randomized tandem study.
Halpern Z, Gross SA, Gralnek IM, Shpak B, Pochapin M, Hoffman A, Mizrahi M, Rochberger YS, Moshkowitz M, Santo E, Melhem A, Grinshpon R, Pfefer J, Kiesslich R. Halpern Z, et al. Among authors: shpak b. Endoscopy. 2015 Mar;47(3):238-44. doi: 10.1055/s-0034-1391437. Epub 2015 Feb 17. Endoscopy. 2015. PMID: 25704662 Clinical Trial.
Isolation of luminescence system from the luminescent fungus Neonothopanus nambi.
Bondar VS, Puzyr' AP, Purtov KV, Petunin AI, Burov AE, Rodicheva EK, Medvedeva SE, Shpak BA, Tyaglik AB, Shimomura O, Gitel'zon II. Bondar VS, et al. Among authors: shpak ba. Dokl Biochem Biophys. 2014 Mar;455(1):56-8. doi: 10.1134/S1607672914020045. Epub 2014 May 3. Dokl Biochem Biophys. 2014. PMID: 24795100 No abstract available.
On the mechanism of luminescence of the fungus Neonothopanus nambi.
Bondar VS, Rodicheva EK, Medvedeva SE, Tyulkova NA, Tyaglik AB, Shpak BA, Gitelson JI. Bondar VS, et al. Among authors: shpak ba. Dokl Biochem Biophys. 2013 Mar-Apr;449:80-3. doi: 10.1134/S1607672913020075. Epub 2013 May 9. Dokl Biochem Biophys. 2013. PMID: 23657652 No abstract available.
33 results