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De novo variants in genes regulating stress granule assembly associate with neurodevelopmental disorders.
Sci Adv. 2022 Aug 19;8(33):eabo7112. doi: 10.1126/sciadv.abo7112. Epub 2022 Aug 17.
Sci Adv. 2022.
PMID: 35977029
Free PMC article.
Tight cooperation between Mot1p and NC2β in regulating genome-wide transcription, repression of transcription following heat shock induction and genetic interaction with SAGA.
Spedale G, Meddens CA, Koster MJ, Ko CW, van Hooff SR, Holstege FC, Timmers HT, Pijnappel WW.
Spedale G, et al. Among authors: meddens ca.
Nucleic Acids Res. 2012 Feb;40(3):996-1008. doi: 10.1093/nar/gkr784. Epub 2011 Oct 5.
Nucleic Acids Res. 2012.
PMID: 21976730
Free PMC article.
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Non-coding DNA in IBD: from sequence variation in DNA regulatory elements to novel therapeutic potential.
Meddens CA, van der List ACJ, Nieuwenhuis EES, Mokry M.
Meddens CA, et al.
Gut. 2019 May;68(5):928-941. doi: 10.1136/gutjnl-2018-317516. Epub 2019 Jan 28.
Gut. 2019.
PMID: 30692146
Free article.
Review.
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Many inflammatory bowel disease risk loci include regions that regulate gene expression in immune cells and the intestinal epithelium.
Mokry M, Middendorp S, Wiegerinck CL, Witte M, Teunissen H, Meddens CA, Cuppen E, Clevers H, Nieuwenhuis EE.
Mokry M, et al. Among authors: meddens ca.
Gastroenterology. 2014 Apr;146(4):1040-7. doi: 10.1053/j.gastro.2013.12.003. Epub 2013 Dec 12.
Gastroenterology. 2014.
PMID: 24333384
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Systematic analysis of chromatin interactions at disease associated loci links novel candidate genes to inflammatory bowel disease.
Meddens CA, Harakalova M, van den Dungen NA, Foroughi Asl H, Hijma HJ, Cuppen EP, Björkegren JL, Asselbergs FW, Nieuwenhuis EE, Mokry M.
Meddens CA, et al.
Genome Biol. 2016 Nov 30;17(1):247. doi: 10.1186/s13059-016-1100-3.
Genome Biol. 2016.
PMID: 27903283
Free PMC article.
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Chromatin Conformation Links Distal Target Genes to CKD Loci.
Brandt MM, Meddens CA, Louzao-Martinez L, van den Dungen NAM, Lansu NR, Nieuwenhuis EES, Duncker DJ, Verhaar MC, Joles JA, Mokry M, Cheng C.
Brandt MM, et al. Among authors: meddens ca.
J Am Soc Nephrol. 2018 Feb;29(2):462-476. doi: 10.1681/ASN.2016080875. Epub 2017 Nov 1.
J Am Soc Nephrol. 2018.
PMID: 29093029
Free PMC article.
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Additional Candidate Genes for Human Atherosclerotic Disease Identified Through Annotation Based on Chromatin Organization.
Haitjema S, Meddens CA, van der Laan SW, Kofink D, Harakalova M, Tragante V, Foroughi Asl H, van Setten J, Brandt MM, Bis JC, O'Donnell C, Cheng C, Hoefer IE, Waltenberger J, Biessen E, Jukema JW, Doevendans PA, Nieuwenhuis EE, Erdmann J, Björkegren JL, Pasterkamp G, Asselbergs FW, den Ruijter HM, Mokry M.
Haitjema S, et al. Among authors: meddens ca.
Circ Cardiovasc Genet. 2017 Apr;10(2):e001664. doi: 10.1161/CIRCGENETICS.116.001664.
Circ Cardiovasc Genet. 2017.
PMID: 28320757
Free article.
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