Gifford DK - Search Results

1

Transcriptional dynamics of murine motor neuron maturation in vivo and in vitro.

Patel T, Hammelman J, Aziz S, Jang S, Closser M, Michaels TL, Blum JA, Gifford DK, Wichterle H. Patel T, et al. Among authors: gifford dk. Nat Commun. 2022 Sep 15;13(1):5427. doi: 10.1038/s41467-022-33022-4. Nat Commun. 2022. PMID: 36109497 Free PMC article.

2

Global control of motor neuron topography mediated by the repressive actions of a single hox gene.

Jung H, Lacombe J, Mazzoni EO, Liem KF Jr, Grinstein J, Mahony S, Mukhopadhyay D, Gifford DK, Young RA, Anderson KV, Wichterle H, Dasen JS. Jung H, et al. Among authors: gifford dk. Neuron. 2010 Sep 9;67(5):781-96. doi: 10.1016/j.neuron.2010.08.008. Neuron. 2010. PMID: 20826310 Free PMC article.

3

Ligand-dependent dynamics of retinoic acid receptor binding during early neurogenesis.

Mahony S, Mazzoni EO, McCuine S, Young RA, Wichterle H, Gifford DK. Mahony S, et al. Among authors: gifford dk. Genome Biol. 2011;12(1):R2. doi: 10.1186/gb-2011-12-1-r2. Epub 2011 Jan 13. Genome Biol. 2011. PMID: 21232103 Free PMC article.

4

Embryonic stem cell-based mapping of developmental transcriptional programs.

Mazzoni EO, Mahony S, Iacovino M, Morrison CA, Mountoufaris G, Closser M, Whyte WA, Young RA, Kyba M, Gifford DK, Wichterle H. Mazzoni EO, et al. Among authors: gifford dk. Nat Methods. 2011 Nov 13;8(12):1056-8. doi: 10.1038/nmeth.1775. Nat Methods. 2011. PMID: 22081127 Free PMC article.

5

Lineage-based identification of cellular states and expression programs.

Hashimoto T, Jaakkola T, Sherwood R, Mazzoni EO, Wichterle H, Gifford D. Hashimoto T, et al. Bioinformatics. 2012 Jun 15;28(12):i250-7. doi: 10.1093/bioinformatics/bts204. Bioinformatics. 2012. PMID: 22689769 Free PMC article.

6

Synergistic binding of transcription factors to cell-specific enhancers programs motor neuron identity.

Mazzoni EO, Mahony S, Closser M, Morrison CA, Nedelec S, Williams DJ, An D, Gifford DK, Wichterle H. Mazzoni EO, et al. Among authors: gifford dk. Nat Neurosci. 2013 Sep;16(9):1219-27. doi: 10.1038/nn.3467. Epub 2013 Jul 21. Nat Neurosci. 2013. PMID: 23872598 Free PMC article.

7

Neuroscience. Mapping neuronal diversity one cell at a time.

Wichterle H, Gifford D, Mazzoni E. Wichterle H, et al. Science. 2013 Aug 16;341(6147):726-7. doi: 10.1126/science.1235884. Science. 2013. PMID: 23950522 No abstract available.

8

Saltatory remodeling of Hox chromatin in response to rostrocaudal patterning signals.

Mazzoni EO, Mahony S, Peljto M, Patel T, Thornton SR, McCuine S, Reeder C, Boyer LA, Young RA, Gifford DK, Wichterle H. Mazzoni EO, et al. Among authors: gifford dk. Nat Neurosci. 2013 Sep;16(9):1191-1198. doi: 10.1038/nn.3490. Epub 2013 Aug 18. Nat Neurosci. 2013. PMID: 23955559 Free PMC article.

9

An integrated model of multiple-condition ChIP-Seq data reveals predeterminants of Cdx2 binding.

Mahony S, Edwards MD, Mazzoni EO, Sherwood RI, Kakumanu A, Morrison CA, Wichterle H, Gifford DK. Mahony S, et al. Among authors: gifford dk. PLoS Comput Biol. 2014 Mar 27;10(3):e1003501. doi: 10.1371/journal.pcbi.1003501. eCollection 2014 Mar. PLoS Comput Biol. 2014. PMID: 24675637 Free PMC article.

10

High resolution mapping of enhancer-promoter interactions.

Reeder C, Closser M, Poh HM, Sandhu K, Wichterle H, Gifford D. Reeder C, et al. PLoS One. 2015 May 13;10(5):e0122420. doi: 10.1371/journal.pone.0122420. eCollection 2015. PLoS One. 2015. PMID: 25970635 Free PMC article.

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