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Single-molecule chromatin configurations link transcription factor binding to expression in human cells.
bioRxiv [Preprint]. 2024 Feb 4:2024.02.02.578660. doi: 10.1101/2024.02.02.578660.
bioRxiv. 2024.
PMID: 38352517
Free PMC article.
Preprint.
A microwell platform for high-throughput longitudinal phenotyping and selective retrieval of organoids.
Sockell A, Wong W, Longwell S, Vu T, Karlsson K, Mokhtari D, Schaepe J, Lo YH, Cornelius V, Kuo C, Van Valen D, Curtis C, Fordyce PM.
Sockell A, et al. Among authors: schaepe j.
Cell Syst. 2023 Sep 20;14(9):764-776.e6. doi: 10.1016/j.cels.2023.08.002.
Cell Syst. 2023.
PMID: 37734323
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Short tandem repeats bind transcription factors to tune eukaryotic gene expression.
Horton CA, Alexandari AM, Hayes MGB, Marklund E, Schaepe JM, Aditham AK, Shah N, Suzuki PH, Shrikumar A, Afek A, Greenleaf WJ, Gordân R, Zeitlinger J, Kundaje A, Fordyce PM.
Horton CA, et al. Among authors: schaepe jm.
Science. 2023 Sep 22;381(6664):eadd1250. doi: 10.1126/science.add1250. Epub 2023 Sep 22.
Science. 2023.
PMID: 37733848
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Systematic discovery of recombinases for efficient integration of large DNA sequences into the human genome.
Durrant MG, Fanton A, Tycko J, Hinks M, Chandrasekaran SS, Perry NT, Schaepe J, Du PP, Lotfy P, Bassik MC, Bintu L, Bhatt AS, Hsu PD.
Durrant MG, et al. Among authors: schaepe j.
Nat Biotechnol. 2023 Apr;41(4):488-499. doi: 10.1038/s41587-022-01494-w. Epub 2022 Oct 10.
Nat Biotechnol. 2023.
PMID: 36217031
Free PMC article.
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Neuronal defects in a human cellular model of 22q11.2 deletion syndrome.
Khan TA, Revah O, Gordon A, Yoon SJ, Krawisz AK, Goold C, Sun Y, Kim CH, Tian Y, Li MY, Schaepe JM, Ikeda K, Amin ND, Sakai N, Yazawa M, Kushan L, Nishino S, Porteus MH, Rapoport JL, Bernstein JA, O'Hara R, Bearden CE, Hallmayer JF, Huguenard JR, Geschwind DH, Dolmetsch RE, Paşca SP.
Khan TA, et al. Among authors: schaepe jm.
Nat Med. 2020 Dec;26(12):1888-1898. doi: 10.1038/s41591-020-1043-9. Epub 2020 Sep 28.
Nat Med. 2020.
PMID: 32989314
Free PMC article.
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