Fordyce P - Search Results

1

Large-scale mapping and mutagenesis of human transcriptional effector domains.

DelRosso N, Tycko J, Suzuki P, Andrews C, Aradhana, Mukund A, Liongson I, Ludwig C, Spees K, Fordyce P, Bassik MC, Bintu L. DelRosso N, et al. Among authors: fordyce p. Nature. 2023 Apr;616(7956):365-372. doi: 10.1038/s41586-023-05906-y. Epub 2023 Apr 5. Nature. 2023. PMID: 37020022 Free PMC article.

2

De novo identification and biophysical characterization of transcription-factor binding sites with microfluidic affinity analysis.

Fordyce PM, Gerber D, Tran D, Zheng J, Li H, DeRisi JL, Quake SR. Fordyce PM, et al. Nat Biotechnol. 2010 Sep;28(9):970-5. doi: 10.1038/nbt.1675. Epub 2010 Aug 29. Nat Biotechnol. 2010. PMID: 20802496 Free PMC article.

3

Double Emulsion Picoreactors for High-Throughput Single-Cell Encapsulation and Phenotyping via FACS.

Brower KK, Khariton M, Suzuki PH, Still C 2nd, Kim G, Calhoun SGK, Qi LS, Wang B, Fordyce PM. Brower KK, et al. Anal Chem. 2020 Oct 6;92(19):13262-13270. doi: 10.1021/acs.analchem.0c02499. Epub 2020 Sep 23. Anal Chem. 2020. PMID: 32900183 Free PMC article.

4

High-Throughput Affinity Measurements of Transcription Factor and DNA Mutations Reveal Affinity and Specificity Determinants.

Aditham AK, Markin CJ, Mokhtari DA, DelRosso N, Fordyce PM. Aditham AK, et al. Cell Syst. 2021 Feb 17;12(2):112-127.e11. doi: 10.1016/j.cels.2020.11.012. Epub 2020 Dec 22. Cell Syst. 2021. PMID: 33340452 Free article.

5

A bead-based method for high-throughput mapping of the sequence- and force-dependence of T cell activation.

Feng Y, Zhao X, White AK, Garcia KC, Fordyce PM. Feng Y, et al. Nat Methods. 2022 Oct;19(10):1295-1305. doi: 10.1038/s41592-022-01592-2. Epub 2022 Sep 5. Nat Methods. 2022. PMID: 36064771

6

Short tandem repeats bind transcription factors to tune eukaryotic gene expression.

Horton CA, Alexandari AM, Hayes MGB, Marklund E, Schaepe JM, Aditham AK, Shah N, Suzuki PH, Shrikumar A, Afek A, Greenleaf WJ, Gordân R, Zeitlinger J, Kundaje A, Fordyce PM. Horton CA, et al. Among authors: fordyce pm. Science. 2023 Sep 22;381(6664):eadd1250. doi: 10.1126/science.add1250. Epub 2023 Sep 22. Science. 2023. PMID: 37733848

7

Design automation of microfluidic single and double emulsion droplets with machine learning.

Lashkaripour A, McIntyre DP, Calhoun SGK, Krauth K, Densmore DM, Fordyce PM. Lashkaripour A, et al. Among authors: fordyce pm. Nat Commun. 2024 Jan 2;15(1):83. doi: 10.1038/s41467-023-44068-3. Nat Commun. 2024. PMID: 38167827 Free PMC article.

8

High-throughput chromatin accessibility profiling at single-cell resolution.

Mezger A, Klemm S, Mann I, Brower K, Mir A, Bostick M, Farmer A, Fordyce P, Linnarsson S, Greenleaf W. Mezger A, et al. Among authors: fordyce p. Nat Commun. 2018 Sep 7;9(1):3647. doi: 10.1038/s41467-018-05887-x. Nat Commun. 2018. PMID: 30194434 Free PMC article.

9

Satb1 integrates DNA binding site geometry and torsional stress to differentially target nucleosome-dense regions.

Ghosh RP, Shi Q, Yang L, Reddick MP, Nikitina T, Zhurkin VB, Fordyce P, Stasevich TJ, Chang HY, Greenleaf WJ, Liphardt JT. Ghosh RP, et al. Among authors: fordyce p. Nat Commun. 2019 Jul 19;10(1):3221. doi: 10.1038/s41467-019-11118-8. Nat Commun. 2019. PMID: 31324780 Free PMC article.

10

Metasurface optofluidics for dynamic control of light fields.

Li Q, van de Groep J, White AK, Song JH, Longwell SA, Fordyce PM, Quake SR, Kik PG, Brongersma ML. Li Q, et al. Nat Nanotechnol. 2022 Oct;17(10):1097-1103. doi: 10.1038/s41565-022-01197-y. Epub 2022 Sep 26. Nat Nanotechnol. 2022. PMID: 36163507

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