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De novo design of protein interactions with learned surface fingerprints.
Nature. 2023 May;617(7959):176-184. doi: 10.1038/s41586-023-05993-x. Epub 2023 Apr 26.
Nature. 2023.
PMID: 37100904
Free PMC article.
De novo protein design by inversion of the AlphaFold structure prediction network.
Goverde CA, Wolf B, Khakzad H, Rosset S, Correia BE.
Goverde CA, et al.
Protein Sci. 2023 Jun;32(6):e4653. doi: 10.1002/pro.4653.
Protein Sci. 2023.
PMID: 37165539
Free PMC article.
Item in Clipboard
Opportunities and challenges in design and optimization of protein function.
Listov D, Goverde CA, Correia BE, Fleishman SJ.
Listov D, et al. Among authors: goverde ca.
Nat Rev Mol Cell Biol. 2024 Apr 2. doi: 10.1038/s41580-024-00718-y. Online ahead of print.
Nat Rev Mol Cell Biol. 2024.
PMID: 38565617
Review.
Item in Clipboard
Computational design of soluble functional analogues of integral membrane proteins.
Goverde CA, Pacesa M, Goldbach N, Dornfeld LJ, Balbi PEM, Georgeon S, Rosset S, Kapoor S, Choudhury J, Dauparas J, Schellhaas C, Kozlov S, Baker D, Ovchinnikov S, Vecchio AJ, Correia BE.
Goverde CA, et al.
bioRxiv [Preprint]. 2024 Mar 7:2023.05.09.540044. doi: 10.1101/2023.05.09.540044.
bioRxiv. 2024.
PMID: 38496615
Free PMC article.
Preprint.
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An atlas of protein homo-oligomerization across domains of life.
Schweke H, Pacesa M, Levin T, Goverde CA, Kumar P, Duhoo Y, Dornfeld LJ, Dubreuil B, Georgeon S, Ovchinnikov S, Woolfson DN, Correia BE, Dey S, Levy ED.
Schweke H, et al. Among authors: goverde ca.
Cell. 2024 Feb 15;187(4):999-1010.e15. doi: 10.1016/j.cell.2024.01.022. Epub 2024 Feb 6.
Cell. 2024.
PMID: 38325366
Free article.
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A new age in protein design empowered by deep learning.
Khakzad H, Igashov I, Schneuing A, Goverde C, Bronstein M, Correia B.
Khakzad H, et al. Among authors: goverde c.
Cell Syst. 2023 Nov 15;14(11):925-939. doi: 10.1016/j.cels.2023.10.006.
Cell Syst. 2023.
PMID: 37972559
Review.
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