Zimmermann O - Search Results

1

SPEADI: Accelerated Analysis of IDP-Ion Interactions from MD-Trajectories.

de Bruyn E, Dorn AE, Zimmermann O, Rossetti G. de Bruyn E, et al. Among authors: zimmermann o. Biology (Basel). 2023 Apr 10;12(4):581. doi: 10.3390/biology12040581. Biology (Basel). 2023. PMID: 37106781 Free PMC article.

2

Backbone Dihedral Angle Prediction.

Zimmermann O. Zimmermann O. Methods Mol Biol. 2017;1484:65-82. doi: 10.1007/978-1-4939-6406-2_7. Methods Mol Biol. 2017. PMID: 27787821

3

The effect of composition on diffusion of macromolecules in a crowded environment.

Kondrat S, Zimmermann O, Wiechert W, von Lieres E. Kondrat S, et al. Among authors: zimmermann o. Phys Biol. 2015 May 28;12(4):046003. doi: 10.1088/1478-3975/12/4/046003. Phys Biol. 2015. PMID: 26020120

4

BETTY: prediction of beta-strand type from sequence.

Zimmermann O, Wang L, Hansmann UH. Zimmermann O, et al. In Silico Biol. 2007;7(4-5):535-42. In Silico Biol. 2007. PMID: 18391242

5

Folding of Top7 in unbiased all-atom Monte Carlo simulations.

Mohanty S, Meinke JH, Zimmermann O. Mohanty S, et al. Among authors: zimmermann o. Proteins. 2013 Aug;81(8):1446-56. doi: 10.1002/prot.24295. Epub 2013 Jul 2. Proteins. 2013. PMID: 23553942

6

Systematically Scrutinizing the Impact of Substitution Sites on Thermostability and Detergent Tolerance for Bacillus subtilis Lipase A.

Nutschel C, Fulton A, Zimmermann O, Schwaneberg U, Jaeger KE, Gohlke H. Nutschel C, et al. Among authors: zimmermann o. J Chem Inf Model. 2020 Mar 23;60(3):1568-1584. doi: 10.1021/acs.jcim.9b00954. Epub 2020 Jan 16. J Chem Inf Model. 2020. PMID: 31905288

7

Comprehensive large-scale assessment of intrinsic protein disorder.

Walsh I, Giollo M, Di Domenico T, Ferrari C, Zimmermann O, Tosatto SC. Walsh I, et al. Among authors: zimmermann o. Bioinformatics. 2015 Jan 15;31(2):201-8. doi: 10.1093/bioinformatics/btu625. Epub 2014 Sep 21. Bioinformatics. 2015. PMID: 25246432

8

Discrete-continuous reaction-diffusion model with mobile point-like sources and sinks.

Kondrat S, Zimmermann O, Wiechert W, von Lieres E. Kondrat S, et al. Among authors: zimmermann o. Eur Phys J E Soft Matter. 2016 Jan;39(1):11. doi: 10.1140/epje/i2016-16011-0. Epub 2016 Jan 29. Eur Phys J E Soft Matter. 2016. PMID: 26830760

9

Simulation of Top7-CFr: a transient helix extension guides folding.

Mohanty S, Meinke JH, Zimmermann O, Hansmann UH. Mohanty S, et al. Among authors: zimmermann o. Proc Natl Acad Sci U S A. 2008 Jun 10;105(23):8004-7. doi: 10.1073/pnas.0708411105. Epub 2008 Apr 11. Proc Natl Acad Sci U S A. 2008. PMID: 18408166 Free PMC article.

10

Scientific workflow optimization for improved peptide and protein identification.

Holl S, Mohammed Y, Zimmermann O, Palmblad M. Holl S, et al. Among authors: zimmermann o. BMC Bioinformatics. 2015 Sep 3;16(1):284. doi: 10.1186/s12859-015-0714-x. BMC Bioinformatics. 2015. PMID: 26335531 Free PMC article.

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