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Modeling islet enhancers using deep learning identifies candidate causal variants at loci associated with T2D and glycemic traits.
Hudaiberdiev S, Taylor DL, Song W, Narisu N, Bhuiyan RM, Taylor HJ, Tang X, Yan T, Swift AJ, Bonnycastle LL, Consortium D, Chen S, Stitzel ML, Erdos MR, Ovcharenko I, Collins FS. Hudaiberdiev S, et al. Among authors: stitzel ml. Proc Natl Acad Sci U S A. 2023 Aug 29;120(35):e2206612120. doi: 10.1073/pnas.2206612120. Epub 2023 Aug 21. Proc Natl Acad Sci U S A. 2023. PMID: 37603758 Free PMC article.
Variation in histone configurations correlates with gene expression across nine inbred strains of mice.
Tyler AL, Spruce C, Kursawe R, Haber A, Ball RL, Pitman WA, Fine AD, Raghupathy N, Walker M, Philip VM, Baker CL, Mahoney JM, Churchill GA, Trowbridge JJ, Stitzel ML, Paigen K, Petkov PM, Carter GW. Tyler AL, et al. Among authors: stitzel ml. Genome Res. 2023 Jun;33(6):857-871. doi: 10.1101/gr.277467.122. Epub 2023 May 22. Genome Res. 2023. PMID: 37217254 Free PMC article.
Author Correction: Direct characterization of cis-regulatory elements and functional dissection of complex genetic associations using HCR-FlowFISH.
Reilly SK, Gosai SJ, Gutierrez A, Mackay-Smith A, Ulirsch JC, Kanai M, Mouri K, Berenzy D, Kales S, Butler GM, Gladden-Young A, Bhuiyan RM, Stitzel ML, Finucane HK, Sabeti PC, Tewhey R. Reilly SK, et al. Among authors: stitzel ml. Nat Genet. 2021 Oct;53(10):1517. doi: 10.1038/s41588-021-00943-7. Nat Genet. 2021. PMID: 34497403 No abstract available.
Tet2 Controls the Responses of β cells to Inflammation in Autoimmune Diabetes.
Rui J, Deng S, Perdigoto AL, Ponath G, Kursawe R, Lawlor N, Sumida T, Levine-Ritterman M, Stitzel ML, Pitt D, Lu J, Herold KC. Rui J, et al. Among authors: stitzel ml. Nat Commun. 2021 Aug 20;12(1):5074. doi: 10.1038/s41467-021-25367-z. Nat Commun. 2021. PMID: 34417463 Free PMC article.
Direct characterization of cis-regulatory elements and functional dissection of complex genetic associations using HCR-FlowFISH.
Reilly SK, Gosai SJ, Gutierrez A, Mackay-Smith A, Ulirsch JC, Kanai M, Mouri K, Berenzy D, Kales S, Butler GM, Gladden-Young A, Bhuiyan RM, Stitzel ML, Finucane HK, Sabeti PC, Tewhey R. Reilly SK, et al. Among authors: stitzel ml. Nat Genet. 2021 Aug;53(8):1166-1176. doi: 10.1038/s41588-021-00900-4. Epub 2021 Jul 29. Nat Genet. 2021. PMID: 34326544 Free PMC article.
43 results