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An integrated cell atlas of the lung in health and disease.
Nat Med. 2023 Jun;29(6):1563-1577. doi: 10.1038/s41591-023-02327-2. Epub 2023 Jun 8.
Nat Med. 2023.
PMID: 37291214
Free PMC article.
Benchmarking atlas-level data integration in single-cell genomics.
Luecken MD, Büttner M, Chaichoompu K, Danese A, Interlandi M, Mueller MF, Strobl DC, Zappia L, Dugas M, Colomé-Tatché M, Theis FJ.
Luecken MD, et al. Among authors: strobl dc.
Nat Methods. 2022 Jan;19(1):41-50. doi: 10.1038/s41592-021-01336-8. Epub 2021 Dec 23.
Nat Methods. 2022.
PMID: 34949812
Free PMC article.
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Synthetic enforcement of STING signaling in cancer cells appropriates the immune microenvironment for checkpoint inhibitor therapy.
Vornholz L, Isay SE, Kurgyis Z, Strobl DC, Loll P, Mosa MH, Luecken MD, Sterr M, Lickert H, Winter C, Greten FR, Farin HF, Theis FJ, Ruland J.
Vornholz L, et al. Among authors: strobl dc.
Sci Adv. 2023 Mar 17;9(11):eadd8564. doi: 10.1126/sciadv.add8564. Epub 2023 Mar 15.
Sci Adv. 2023.
PMID: 36921054
Free PMC article.
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Best practices for single-cell analysis across modalities.
Heumos L, Schaar AC, Lance C, Litinetskaya A, Drost F, Zappia L, Lücken MD, Strobl DC, Henao J, Curion F; Single-cell Best Practices Consortium; Schiller HB, Theis FJ.
Heumos L, et al. Among authors: strobl dc.
Nat Rev Genet. 2023 Aug;24(8):550-572. doi: 10.1038/s41576-023-00586-w. Epub 2023 Mar 31.
Nat Rev Genet. 2023.
PMID: 37002403
Free PMC article.
Review.
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Single-cell reference mapping to construct and extend cell-type hierarchies.
Michielsen L, Lotfollahi M, Strobl D, Sikkema L, Reinders MJT, Theis FJ, Mahfouz A.
Michielsen L, et al.
NAR Genom Bioinform. 2023 Jul 26;5(3):lqad070. doi: 10.1093/nargab/lqad070. eCollection 2023 Sep.
NAR Genom Bioinform. 2023.
PMID: 37502708
Free PMC article.
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Defining and benchmarking open problems in single-cell analysis.
Luecken MD, Gigante S, Burkhardt DB, Cannoodt R, Strobl DC, Markov NS, Zappia L, Palla G, Lewis W, Dimitrov D, Vinyard ME, Magruder DS, Andersson A, Dann E, Qin Q, Otto DJ, Klein M, Botvinnik OB, Deconinck L, Waldrant K; Open Problems Jamboree Members; Bloom JM, Pisco AO, Saez-Rodriguez J, Wulsin D, Pinello L, Saeys Y, Theis FJ, Krishnaswamy S.
Luecken MD, et al. Among authors: strobl dc.
Res Sq [Preprint]. 2024 Apr 4:rs.3.rs-4181617. doi: 10.21203/rs.3.rs-4181617/v1.
Res Sq. 2024.
PMID: 38645152
Free PMC article.
Preprint.
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RelB contributes to the survival, migration and lymphomagenesis of B cells with constitutively active CD40 signaling.
Kuhn LB, Valentin S, Stojanovic K, Strobl DC, Babushku T, Wang Y, Rambold U, Scheffler L, Grath S, John-Robbert D, Blum H, Feuchtinger A, Blutke A, Weih F, Kitamura D, Rad R, Strobl LJ, Zimber-Strobl U.
Kuhn LB, et al. Among authors: strobl dc.
Front Immunol. 2022 Aug 30;13:913275. doi: 10.3389/fimmu.2022.913275. eCollection 2022.
Front Immunol. 2022.
PMID: 36110848
Free PMC article.
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